Gb_23545


Description : effector receptor (NLR)


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23545

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00233110 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.02 OrthoFinder output from all 47 species
AMTR_s00101p00036420 No alias External stimuli response.biotic stress.pathogen... 0.01 OrthoFinder output from all 47 species
AMTR_s00109p00126980 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G27180 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 OrthoFinder output from all 47 species
AT1G57650 No alias ATP binding 0.03 OrthoFinder output from all 47 species
AT1G63880 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G66090 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT1G72890 No alias Disease resistance protein (TIR-NBS class) 0.02 OrthoFinder output from all 47 species
AT2G14080 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT4G08450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
AT4G16890 SNC1, BAL disease resistance protein (TIR-NBS-LRR class), putative 0.03 OrthoFinder output from all 47 species
AT4G16990 RLM3 disease resistance protein (TIR-NBS class), putative 0.02 OrthoFinder output from all 47 species
AT5G38350 No alias Disease resistance protein (NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT5G40090 No alias Disease resistance protein (TIR-NBS class) 0.01 OrthoFinder output from all 47 species
AT5G41540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
AT5G41750 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT5G46490 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species
AT5G46500 No alias BEST Arabidopsis thaliana protein match is: disease... 0.02 OrthoFinder output from all 47 species
AT5G48780 No alias disease resistance protein (TIR-NBS class) 0.17 OrthoFinder output from all 47 species
AT5G49140 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G51630 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
Adi_g033603 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g054307 No alias effector receptor *(NLR) & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g086465 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g04457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18880 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g36971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45501.t1 LAZ5, Aspi01Gene45501 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene48759.t1 Aspi01Gene48759 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene60107.t1 Aspi01Gene60107 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.08G025600.1 WRKY16,... not classified & original description: pacid=50638055... 0.02 OrthoFinder output from all 47 species
Ceric.11G099400.1 Ceric.11G099400 not classified & original description: pacid=50595890... 0.01 OrthoFinder output from all 47 species
Ceric.15G016100.1 Ceric.15G016100 not classified & original description: pacid=50640408... 0.01 OrthoFinder output from all 47 species
Ceric.15G017300.1 Ceric.15G017300 not classified & original description: pacid=50640848... 0.02 OrthoFinder output from all 47 species
Ceric.1Z038400.1 Ceric.1Z038400 not classified & original description: pacid=50622569... 0.01 OrthoFinder output from all 47 species
Ceric.1Z038500.1 Ceric.1Z038500 not classified & original description: pacid=50622568... 0.01 OrthoFinder output from all 47 species
Ceric.1Z249000.1 RLM3, Ceric.1Z249000 not classified & original description: pacid=50576849... 0.06 OrthoFinder output from all 47 species
Dac_g43390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50145 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g08803 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_02871 No alias Disease resistance-like protein DSC1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_03492 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Gb_03493 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_04748 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_04749 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
Gb_07498 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
Gb_09783 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
Gb_12483 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_17461 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_20223 No alias effector receptor (NLR) 0.07 OrthoFinder output from all 47 species
Gb_21496 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_23306 No alias effector receptor (NLR) 0.08 OrthoFinder output from all 47 species
Gb_23307 No alias effector receptor (NLR) 0.06 OrthoFinder output from all 47 species
Gb_25646 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
Gb_26523 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
Gb_27126 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
Gb_27878 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
Gb_29198 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
Gb_33283 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_36252 No alias effector receptor (NLR) 0.07 OrthoFinder output from all 47 species
Gb_40694 No alias effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
MA_109735g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_131802g0020 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_136716g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_169911g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_172043g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_365179g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_397657g0020 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_410141g0010 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
MA_471335g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_525082g0020 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.07 OrthoFinder output from all 47 species
MA_53125g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_75103g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_89787g0020 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g20725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g25030 No alias effector receptor *(NLR) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g31908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g38153 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43268 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g55018 No alias effector receptor *(NLR) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c16_21740V3.1 Pp3c16_21740 No annotation 0.01 OrthoFinder output from all 47 species
Solyc02g082050.3.1 Solyc02g082050 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc04g007320.3.1 Solyc04g007320 effector receptor (NLR) 0.01 OrthoFinder output from all 47 species
Solyc07g055610.3.1 Solyc07g055610 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc09g092410.4.1 Solyc09g092410 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002182 NB-ARC 250 388
IPR000157 TIR_dom 18 192
No external refs found!