Aliases : CRR2
Description : Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana (sp|q9stf3|pp265_arath : 579.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_23678 | |
| Cluster | HCCA: Cluster_120 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00032470 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00011p00266560 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00012p00252800 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00115350 | RARE1,... | Pentatricopeptide repeat-containing protein At5g13270,... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00242080 | CRR28,... | Pentatricopeptide repeat-containing protein At1g59720,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00155620 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00029p00235510 | OTP84,... | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00071p00184210 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00081p00056740 | OTP82,... | Pentatricopeptide repeat-containing protein At1g08070,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00098p00155650 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g39350... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00111p00107400 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21065... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00129p00082590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g19720... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00130p00019530 | DOT4,... | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00170p00032020 | OTP86,... | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G11290 | CRR22 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G15510 | VAC1, ECB2, ATECB2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT1G18485 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
| AT2G33760 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G22150 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G57430 | OTP84 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| AT3G63370 | OTP86 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G44785 | OSB3 | organellar single-stranded DNA binding protein 3 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g004462 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g007209 | OTP81 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g065393 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g04005 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13233 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g17653 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g34016 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g38943 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19219 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g39842 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04156 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09708 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g17248 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene17592.t1 | Aspi01Gene17592 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g016150 | No alias | not classified & original description: CDS=1-2547 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0125.g048584 | CRR22 | not classified & original description: CDS=1-1611 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g13797 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g25200 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g67245 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67913 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.04G095300.1 | OTP84, Ceric.04G095300 | not classified & original description: pacid=50630887... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G062000.1 | Ceric.10G062000 | ssDNA-binding protein *(OSB) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G078800.1 | Ceric.22G078800 | not classified & original description: pacid=50613807... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.27G011400.1 | Ceric.27G011400 | not classified & original description: pacid=50605728... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g05121 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g18746 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21320 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35972 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g36116 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g47861 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g04930 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g15730 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g23534 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g23599 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28705 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g36299 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g41263 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01000178001 | No alias | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008965001 | No alias | Pentatricopeptide repeat-containing protein At4g18520,... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01009227001 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01009407001 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015466001 | LPA66 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017209001 | VAC1, ECB2, ATECB2 | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017365001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017996001 | No alias | Pentatricopeptide repeat-containing protein At4g14820... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01023971001 | No alias | Pentatricopeptide repeat-containing protein At4g35130,... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01033190001 | OTP82 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036207001 | OTP82 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_06560 | OTP84 | Pentatricopeptide repeat-containing protein At4g21300... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_13717 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_16898 | No alias | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_30097 | CRR22 | RNA editing factor (CRR21) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_31266 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g10800.1 | DOT4, LOC_Os01g10800 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g62910.1 | CRR2, LOC_Os01g62910 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g50280.1 | CRR22, LOC_Os02g50280 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g04390.1 | LOC_Os03g04390 | Pentatricopeptide repeat-containing protein At4g35130,... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g58100.1 | OTP85, LOC_Os03g58100 | RNA editing factor (OTP85) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g59264.1 | LOC_Os03g59264 | lectin chaperone (CRT) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g39410.1 | OTP86, LOC_Os04g39410 | RNA editing factor (OTP86) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g50950.1 | LOC_Os05g50950 | Pentatricopeptide repeat-containing protein At4g01030,... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g30657 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07787 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g33311 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g35801 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_101084g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_102449g0020 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10426444g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10429371g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10431227g0020 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_123466g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_135075g0020 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_140591g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_178429g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_20622g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| MA_27147g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At3g49170,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_322292g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_381817g0020 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.02 | OrthoFinder output from all 47 species | |
| MA_392600g0010 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.03 | OrthoFinder output from all 47 species | |
| MA_43615g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_52613g0020 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.02 | OrthoFinder output from all 47 species | |
| MA_65500g0010 | No alias | Pentatricopeptide repeat-containing protein At1g08070,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_81105g0010 | REME1 | RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
| MA_81514g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_8319g0010 | CRR2 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_858608g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_9526611g0020 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_953793g0020 | DOT4 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_958908g0010 | OTP84 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28092 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g43041 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g03782 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04945 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g16471 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g39469 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26690 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g27115 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g45078 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03091 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13627 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57196 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06450 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g31070 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g44900 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g55034 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g56081 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g59302 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002209 | No alias | not classified & original description: CDS=347-2416 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003208 | No alias | monogalactosyldiacylglycerol lipase *(HIL1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0140.g022672 | No alias | not classified & original description: CDS=1-3558 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0264.g026932 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2163 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13567 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g33428 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo115259 | CRR2 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
| Smo134463 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g098150.3.1 | emb1899, EMB175,... | Pentatricopeptide repeat-containing protein At5g03800... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g013850.1.1 | CRR21, Solyc08g013850 | RNA editing factor (CRR21) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g065840.3.1 | OSB1, Solyc09g065840 | ssDNA-binding protein (OSB) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g017370.3.1 | Solyc11g017370 | RNA editing factor (AEF1) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g23504 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000301_P001 | Zm00001e000301 | Pentatricopeptide repeat-containing protein At4g35130,... | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e011467_P004 | emb1899, EMB175,... | Pentatricopeptide repeat-containing protein At5g03800... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e015727_P001 | Zm00001e015727 | Pentatricopeptide repeat-containing protein At5g66520... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e016923_P001 | CRR2, Zm00001e016923 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e021457_P001 | CRR22, Zm00001e021457 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023498_P001 | VAC1, ECB2,... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027846_P001 | CRR21, Zm00001e027846 | RNA editing factor (CRR21) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029119_P001 | Zm00001e029119 | Pentatricopeptide repeat-containing protein At2g33760... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e029186_P001 | Zm00001e029186 | Pentatricopeptide repeat-containing protein At1g19720... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e029450_P001 | Zm00001e029450 | Pentatricopeptide repeat-containing protein At2g46050,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031351_P001 | EMB2261, Zm00001e031351 | RNA editing factor (ECD1) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e034445_P001 | LPA66, Zm00001e034445 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |
