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  5. Gb_24034

Gb_24034 (OPCL1)


Aliases : OPCL1

Description : 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana (sp|q84p21|4cll5_arath : 151.0)


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24034

Target Alias Description ECC score Gene Family Method Actions
Aev_g45907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07176 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_13602 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_3340g0010 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.12 OrthoFinder output from all 47 species
MA_6127204g0010 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species
Mp1g05060.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g07170.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g42518 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo181279 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo429785 No alias 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp. japonica 0.05 OrthoFinder output from all 47 species
Tin_g32242 OPCL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 3 257
No external refs found!