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  5. Gb_25193

Gb_25193


Description : RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Pisum sativum (sp|p08927|rubb_pea : 820.0)


Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25193

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00185880 CH-CPN60A,... External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
AMTR_s00106p00119930 CPN60B, LEN1,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Adi_g013083 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013893 CH-CPN60A, CPN60A, SLP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11846 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03270 No alias chaperone *(Hsp60) & original description: none 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020943.69 CH-CPN60A, CPN60A, SLP RuBisCO large subunit-binding protein subunit alpha,... 0.02 OrthoFinder output from all 47 species
Dcu_g08839 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03882 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07618 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37829 No alias chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01012098001 EMB3007 External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
GSVIVT01031526001 CH-CPN60A, CPN60A, SLP External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
LOC_Os09g38980.1 EMB3007, LOC_Os09g38980 subunit alpha of Cpn60 chaperonin complex. component... 0.04 OrthoFinder output from all 47 species
MA_10436772g0010 CH-CPN60A, CPN60A, SLP chaperone (Hsp60) 0.02 OrthoFinder output from all 47 species
MA_587689g0010 CH-CPN60A, CPN60A, SLP RuBisCO large subunit-binding protein subunit alpha... 0.03 OrthoFinder output from all 47 species
MA_97627g0010 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Ore_g08643 No alias chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g15384 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14667 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001253 CH-CPN60A, CPN60A, SLP regulatory factor SNX2 of Retromer protein recycling... 0.04 OrthoFinder output from all 47 species
Sam_g39492 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001025_P002 Zm00001e001025 subunit beta of Cpn60 chaperonin complex. component... 0.03 OrthoFinder output from all 47 species
Zm00001e031536_P001 CH-CPN60A,... subunit alpha of Cpn60 chaperonin complex. component... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016874 ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 94 649
No external refs found!