Aliases : CRR22
Description : Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana (sp|q3e6q1|ppr32_arath : 721.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00115350 | RARE1,... | Pentatricopeptide repeat-containing protein At5g13270,... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00127300 | MEF22,... | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00129p00082590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g19720... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G18485 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G02980 | OTP85 | Pentatricopeptide repeat (PPR) superfamily protein | 0.11 | OrthoFinder output from all 47 species | |
| Adi_g110188 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g35873 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g18401 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g28638 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g28677 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g31523 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g67887 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene21013.t1 | CRR22, Aspi01Gene21013 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G078400.1 | Ceric.11G078400 | not classified & original description: pacid=50596841... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G024800.1 | Ceric.29G024800 | not classified & original description: pacid=50625545... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g06332 | CRR2 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g08885 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g42645 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g47670 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g02801 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03875 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000420001 | MEF22 | RNA processing.organelle machineries.RNA... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01004939001 | RARE1 | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008757001 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01010125001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01012174001 | No alias | Pentatricopeptide repeat-containing protein At2g03380,... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01022230001 | No alias | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01026881001 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01031265001 | LPA66 | Pentatricopeptide repeat-containing protein At5g66520... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01032394001 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033004001 | No alias | Pentatricopeptide repeat-containing protein At3g26782,... | 0.12 | OrthoFinder output from all 47 species | |
| Gb_00199 | OTP84 | Pentatricopeptide repeat-containing protein At3g03580... | 0.11 | OrthoFinder output from all 47 species | |
| Gb_03512 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_05488 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_26861 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.1 | OrthoFinder output from all 47 species | |
| Gb_27879 | VAC1, ECB2, ATECB2 | RNA editing factor (ECB2/VAC1) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_30004 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_32989 | No alias | Pentatricopeptide repeat-containing protein At3g49710... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_35042 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_35786 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g04390.1 | LOC_Os03g04390 | Pentatricopeptide repeat-containing protein At4g35130,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g39410.1 | OTP86, LOC_Os04g39410 | RNA editing factor (OTP86) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18522 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g18559 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g07383 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10429371g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_11074g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_111990g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g13600... | 0.06 | OrthoFinder output from all 47 species | |
| MA_13022g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| MA_13057g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
| MA_136188g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_16823g0010 | CRR22 | RNA editing factor (MEF19) | 0.04 | OrthoFinder output from all 47 species | |
| MA_16917g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| MA_178429g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_184104g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.02 | OrthoFinder output from all 47 species | |
| MA_185098g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At3g49170,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_189553g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| MA_20899g0020 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_230261g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| MA_28607g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_3612g0010 | CRR22 | Pentatricopeptide repeat-containing protein At5g16860... | 0.05 | OrthoFinder output from all 47 species | |
| MA_43615g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_43727g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| MA_442926g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| MA_501007g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| MA_63139g0020 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.08 | OrthoFinder output from all 47 species | |
| MA_8868720g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | OrthoFinder output from all 47 species | |
| MA_953240g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
| MA_96662g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g42872 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05592 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06358 | MEF19 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18601 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53708 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59317 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g62239 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000158 | No alias | not classified & original description: CDS=1-2931 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004580 | No alias | not classified & original description: CDS=1-2331 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g07051 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24764 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g48312 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g081560.2.1 | Solyc01g081560 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g090510.2.1 | Solyc01g090510 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g098480.3.1 | Solyc01g098480 | Pentatricopeptide repeat-containing protein At2g21090... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g099000.1.1 | Solyc01g099000 | Pentatricopeptide repeat-containing protein At3g05340... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc01g110010.3.1 | Solyc01g110010 | Pentatricopeptide repeat-containing protein At1g74600,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g119120.3.1 | Solyc03g119120 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g009400.3.1 | Solyc05g009400 | Pentatricopeptide repeat-containing protein At3g29230... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g012630.2.1 | Solyc05g012630 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g069700.4.1 | Solyc06g069700 | Pentatricopeptide repeat-containing protein At5g61400... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc08g023640.1.1 | Solyc08g023640 | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g007040.1.1 | Solyc09g007040 | Pentatricopeptide repeat-containing protein At3g53360,... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc12g042400.1.1 | SLO1, Solyc12g042400 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g18826 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g21799 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 546 | 571 |
| IPR002885 | Pentatricopeptide_repeat | 76 | 98 |
| IPR002885 | Pentatricopeptide_repeat | 647 | 670 |
| IPR002885 | Pentatricopeptide_repeat | 243 | 268 |
| IPR002885 | Pentatricopeptide_repeat | 343 | 367 |
| IPR032867 | DYW_dom | 745 | 869 |
| IPR002885 | Pentatricopeptide_repeat | 168 | 215 |
| IPR002885 | Pentatricopeptide_repeat | 470 | 518 |
| IPR002885 | Pentatricopeptide_repeat | 369 | 416 |
| IPR002885 | Pentatricopeptide_repeat | 572 | 619 |
| IPR002885 | Pentatricopeptide_repeat | 269 | 316 |
| No external refs found! |
