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  5. Gb_25815

Gb_25815


Description : Putative disease resistance protein RGA3 OS=Solanum bulbocastanum (sp|q7xa40|rga3_solbu : 287.0)


Gene families : OG0000422 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000422_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25815

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00245940 evm_27.TU.AmTr_v1... Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00039p00121770 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00061p00111070 RPM1, RPS3,... Putative disease resistance protein At1g59780... 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00205180 evm_27.TU.AmTr_v1... Putative disease resistance RPP13-like protein 3... 0.05 OrthoFinder output from all 47 species
AMTR_s00088p00057720 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00090p00137350 RPP13,... Disease resistance protein RPP13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00148p00037160 ZAR1,... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT1G10920 LOV1 NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G50180 No alias NB-ARC domain-containing disease resistance protein 0.06 OrthoFinder output from all 47 species
AT1G58390 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT1G58400 No alias Disease resistance protein (CC-NBS-LRR class) family 0.08 OrthoFinder output from all 47 species
AT1G58602 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G59780 No alias NB-ARC domain-containing disease resistance protein 0.06 OrthoFinder output from all 47 species
AT3G07040 RPM1, RPS3 NB-ARC domain-containing disease resistance protein 0.05 OrthoFinder output from all 47 species
AT3G46530 RPP13 NB-ARC domain-containing disease resistance protein 0.05 OrthoFinder output from all 47 species
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT3G50950 ZAR1 HOPZ-ACTIVATED RESISTANCE 1 0.04 OrthoFinder output from all 47 species
AT5G35450 No alias Disease resistance protein (CC-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species
AT5G43470 HRT, RCY1, RPP8 Disease resistance protein (CC-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species
AT5G48620 No alias Disease resistance protein (CC-NBS-LRR class) family 0.06 OrthoFinder output from all 47 species
Aob_g22709 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01026725001 No alias Putative disease resistance protein At1g50180... 0.04 OrthoFinder output from all 47 species
GSVIVT01026750001 HRT, RCY1, RPP8 Disease resistance protein RPP8 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01032825001 No alias Putative disease resistance protein At1g50180... 0.06 OrthoFinder output from all 47 species
GSVIVT01032827001 No alias Putative disease resistance protein At1g50180... 0.04 OrthoFinder output from all 47 species
Gb_10845 LOV1 Putative disease resistance protein RGA3 OS=Solanum... 0.04 OrthoFinder output from all 47 species
Gb_25799 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Gb_25803 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Gb_27427 ZAR1 Putative disease resistance protein RGA3 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Gb_32662 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.03 OrthoFinder output from all 47 species
Gb_40740 RPM1, RPS3 Putative disease resistance protein RGA3 OS=Solanum... 0.07 OrthoFinder output from all 47 species
LOC_Os04g21890.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g46300.1 RPM1, RPS3,... Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g12300.1 LOC_Os11g12300 Disease resistance protein RPM1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os12g37770.1 LOC_Os12g37770 no description available(sp|f7j0n2|rga5r_orysj : 437.0) 0.06 OrthoFinder output from all 47 species
Solyc03g005650.1.1 Solyc03g005650 Probable disease resistance protein At1g58390... 0.05 OrthoFinder output from all 47 species
Solyc03g005670.3.1 Solyc03g005670 Disease resistance RPP8-like protein 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc04g009260.3.1 Solyc04g009260 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g009690.2.1 RPP13, Solyc04g009690 Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc10g008220.4.1 Solyc10g008220 Putative late blight resistance protein homolog R1A-6... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR041118 Rx_N 10 90
IPR001611 Leu-rich_rpt 537 597
IPR002182 NB-ARC 169 407
No external refs found!