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  5. Gb_26262

Gb_26262


Description : effector receptor (NLR)


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_26262

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00250200 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00056p00215980 evm_27.TU.AmTr_v1... Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1... 0.03 OrthoFinder output from all 47 species
AMTR_s00085p00123400 evm_27.TU.AmTr_v1... TMV resistance protein N OS=Nicotiana glutinosa 0.02 OrthoFinder output from all 47 species
AMTR_s00109p00126980 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G31540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G57630 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.02 OrthoFinder output from all 47 species
AT1G61105 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.02 OrthoFinder output from all 47 species
AT1G65850 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT1G72890 No alias Disease resistance protein (TIR-NBS class) 0.04 OrthoFinder output from all 47 species
AT3G25505 No alias No description available 0.03 OrthoFinder output from all 47 species
AT4G08450 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT4G16950 RPP5 Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G38344 No alias Toll-Interleukin-Resistance (TIR) domain family protein 0.03 OrthoFinder output from all 47 species
AT5G38350 No alias Disease resistance protein (NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G46260 No alias disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G46500 No alias BEST Arabidopsis thaliana protein match is: disease... 0.03 OrthoFinder output from all 47 species
AT5G46520 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G58120 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
Adi_g083862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45494.t1 Aspi01Gene45494 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020123001 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
GSVIVT01022984001 No alias External stimuli response.biotic stress.pathogen... 0.04 OrthoFinder output from all 47 species
GSVIVT01029009001 No alias Disease resistance-like protein DSC1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01036400001 No alias External stimuli response.biotic stress.pathogen... 0.05 OrthoFinder output from all 47 species
Gb_03482 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_04201 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_09783 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
Gb_10732 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
Gb_11158 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_12318 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_12483 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_17905 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
Gb_20301 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.02 OrthoFinder output from all 47 species
Gb_21493 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
Gb_33284 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_36252 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_36932 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_40546 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_40694 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
LOC_Os12g31160.1 RPP13, LOC_Os12g31160 no description available(sp|p0do08|pikm2_orysj : 295.0) 0.02 OrthoFinder output from all 47 species
MA_10431791g0010 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10432315g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_36510g0030 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_516333g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_612059g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_662972g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_8760260g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Pir_g41026 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g48408 No alias effector receptor *(NLR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g102930.1.1 Solyc01g102930 no description available(sp|f4jt78|rpp2a_arath : 145.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 16 155
No external refs found!