Description : transcription factor (bHLH)
Gene families : OG0002401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002401_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_26735 | |
| Cluster | HCCA: Cluster_4 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G10585 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01018461001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01022881001 | No alias | Nutrient uptake.copper uptake.regulation.bHLH-Ib... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_26741 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g01870.1 | LOC_Os01g01870 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g39777 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g45090 | ORG3, BHLH039 | bHLH-Ib-class transcriptional regulator of copper/iron... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g47256 | No alias | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g008247.1.1 | Solyc10g008247 | no hits & (original description: none) | 0.08 | OrthoFinder output from all 47 species | |
| Solyc10g079650.2.1 | BHLH100, Solyc10g079650 | transcription factor (bHLH). iron/copper homeostasis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g079660.3.1 | ORG2, BHLH038,... | transcription factor (bHLH). iron/copper homeostasis... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006952 | defense response | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 123 | 181 |
| No external refs found! |
