Description : E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana (sp|q9spl2|cip8_arath : 133.0)
Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G01980 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g102739 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g11642 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01037379001 | RHC1A | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g20588 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g28304 | RHC1A | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g24752 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g09253 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g27709 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g050040.4.1 | ATCRT1, Solyc01g050040 | E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g065650.1.1 | Solyc02g065650 | E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e038199_P001 | RHC1A, Zm00001e038199 | Probable E3 ubiquitin-protein ligase RHC1A... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 383 | 424 |
| No external refs found! |
