Aliases : LRX2
Description : LRR-domain extensin
Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00271610 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00056p00176290 | evm_27.TU.AmTr_v1... | Leucine-rich repeat extensin-like protein 3... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G49490 | No alias | Leucine-rich repeat (LRR) family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G15880 | No alias | Leucine-rich repeat (LRR) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G19020 | No alias | Leucine-rich repeat (LRR) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G18670 | No alias | Leucine-rich repeat (LRR) family protein | 0.04 | OrthoFinder output from all 47 species | |
| Als_g03749 | No alias | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21090 | No alias | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000464 | No alias | LRR-domain extensin & original description: CDS=1-1719 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g03151 | No alias | LRR-domain extensin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.32G025000.1 | Ceric.32G025000 | LRR-domain extensin & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g01171 | LRX1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g31890 | LRX2 | LRR-domain extensin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01018025001 | No alias | Cell wall.cell wall proteins.hydroxyproline-rich... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g49100.1 | LRX2, LOC_Os06g49100 | LRR-domain extensin | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g16811 | No alias | LRR-domain extensin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03283 | LRX2 | LRR-domain extensin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g27437 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g47474 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g05847 | LRX2 | LRR-domain extensin & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Smo134330 | LRX2 | Leucine-rich repeat extensin-like protein 4... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g53147 | LRX2 | LRR-domain extensin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e017627_P001 | LRX2, Zm00001e017627 | Pollen-specific leucine-rich repeat extensin-like... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031241_P001 | Zm00001e031241 | LRR-domain extensin | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013210 | LRR_N_plant-typ | 142 | 174 |
| No external refs found! |
