1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_27491

Gb_27491 (OTP84)


Aliases : OTP84

Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 629.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27491

Target Alias Description ECC score Gene Family Method Actions
Adi_g099287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06621 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g27208 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g30519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g28005 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g36065 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g46171 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Gb_01174 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.05 OrthoFinder output from all 47 species
Gb_03578 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.06 OrthoFinder output from all 47 species
Gb_06115 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
Gb_29995 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
Gb_30097 CRR22 RNA editing factor (CRR21) 0.04 OrthoFinder output from all 47 species
Gb_30147 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
Gb_33210 OTP84 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_33335 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.08 OrthoFinder output from all 47 species
Gb_35108 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Gb_36398 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Lfl_g22764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_112849g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
MA_183278g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
MA_271639g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 OrthoFinder output from all 47 species
MA_30632g0020 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_412g0010 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
MA_57048g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
MA_683665g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_68933g0010 CRR22 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
MA_75512g0010 DOT4 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_805687g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_916566g0010 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_957690g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Nbi_g23872 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g35238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29294 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g095690.2.1 Solyc01g095690 Pentatricopeptide repeat-containing protein At4g01030,... 0.03 OrthoFinder output from all 47 species
Tin_g03506 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04699 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06129 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06604 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09309 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10643 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g11710 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g17737 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g23794 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 147 195
IPR002885 Pentatricopeptide_repeat 575 623
IPR002885 Pentatricopeptide_repeat 342 389
IPR002885 Pentatricopeptide_repeat 473 521
IPR032867 DYW_dom 748 872
IPR002885 Pentatricopeptide_repeat 649 673
IPR002885 Pentatricopeptide_repeat 223 250
IPR002885 Pentatricopeptide_repeat 282 310
IPR002885 Pentatricopeptide_repeat 251 280
IPR002885 Pentatricopeptide_repeat 443 470
No external refs found!