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Gb_27573 (RPL27)


Aliases : RPL27

Description : component psRPL27 of large ribosomal subunit proteome


Gene families : OG0002147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27573
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00039290 RPL27,... Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
AT5G40950 RPL27 ribosomal protein large subunit 27 0.1 OrthoFinder output from all 47 species
Adi_g016906 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ala_g26415 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Als_g01578 No alias component *(bL27m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Als_g25736 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aob_g22562 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g02391 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Aspi01Gene07109.t1 Aspi01Gene07109 component *(bL27m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008370 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Cba_g10062 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ceric.02G065700.1 RPL27, Ceric.02G065700 component *(bL27c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.47 No alias 50S ribosomal protein L27, chloroplastic OS=Spinacia oleracea 0.01 OrthoFinder output from all 47 species
Cre06.g300800 RPL27 50S ribosomal protein L27, chloroplastic OS=Arabidopsis thaliana 0.12 OrthoFinder output from all 47 species
Dac_g01937 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Dcu_g13830 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dde_g18021 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ehy_g20192 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
GSVIVT01033086001 RPL27 Protein biosynthesis.organelle translation... 0.11 OrthoFinder output from all 47 species
LOC_Os01g69950.1 RPL27, LOC_Os01g69950 component psRPL27 of large ribosomal subunit proteome 0.11 OrthoFinder output from all 47 species
Len_g00370 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Lfl_g00153 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
MA_19490g0010 RPL27 component psRPL27 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Mp5g06170.1 RPL27 component psRPL27 of large ribosomal subunit proteome 0.15 OrthoFinder output from all 47 species
Msp_g02665 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Nbi_g16845 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ore_g05914 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Pir_g09149 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009407 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Sam_g12739 No alias component *(bL27c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Smo159042 RPL27 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Solyc11g068820.3.1 RPL27, Solyc11g068820 component psRPL27 of large ribosomal subunit proteome 0.11 OrthoFinder output from all 47 species
Spa_g07212 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Tin_g00464 RPL27 component *(bL27c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Zm00001e028431_P003 RPL27, Zm00001e028431 component psRPL27 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004784 superoxide dismutase activity IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 56 133
No external refs found!