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  5. Gb_27609

Gb_27609


Description : metabolite transporter (DTX)


Gene families : OG0000115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27609

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00178100 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.04 OrthoFinder output from all 47 species
AMTR_s00049p00187420 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder output from all 47 species
AMTR_s00059p00169820 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
AT1G12950 RSH2 root hair specific 2 0.05 OrthoFinder output from all 47 species
AT1G23300 No alias MATE efflux family protein 0.04 OrthoFinder output from all 47 species
AT1G47530 No alias MATE efflux family protein 0.05 OrthoFinder output from all 47 species
AT1G73700 No alias MATE efflux family protein 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013450 No alias metabolite transporter *(DTX) & original description: CDS=77-1441 0.02 OrthoFinder output from all 47 species
Ceric.31G003400.1 Ceric.31G003400 metabolite transporter *(DTX) & original description:... 0.04 OrthoFinder output from all 47 species
Cre01.g051211 No alias Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
Dcu_g32548 No alias metabolite transporter *(DTX) & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01009629001 No alias Solute transport.carrier-mediated transport.MOP... 0.05 OrthoFinder output from all 47 species
GSVIVT01011803001 No alias Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
GSVIVT01014308001 ALF5 Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
GSVIVT01029132001 No alias Solute transport.carrier-mediated transport.MOP... 0.06 OrthoFinder output from all 47 species
GSVIVT01029136001 No alias Solute transport.carrier-mediated transport.MOP... 0.07 OrthoFinder output from all 47 species
Gb_40010 No alias metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
LOC_Os03g37490.1 LOC_Os03g37490 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
LOC_Os07g01750.1 LOC_Os07g01750 metabolite transporter (DTX) 0.06 OrthoFinder output from all 47 species
LOC_Os08g43654.1 LOC_Os08g43654 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_10431371g0010 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_2948g0010 DTX35, FFT, ATDTX35 metabolite transporter (DTX) 0.09 OrthoFinder output from all 47 species
MA_433264g0010 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_45692g0010 TT12, ATTT12 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
MA_9267g0020 No alias metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
MA_92993g0010 No alias metabolite transporter (DTX) 0.06 OrthoFinder output from all 47 species
Ore_g43129 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07687 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g109320.4.1 Solyc01g109320 metabolite transporter (DTX) 0.05 OrthoFinder output from all 47 species
Solyc02g032660.3.1 Solyc02g032660 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Solyc02g091050.3.1 Solyc02g091050 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Solyc02g091070.3.1 Solyc02g091070 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Solyc03g034400.3.1 Solyc03g034400 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Solyc03g118960.3.1 Solyc03g118960 metabolite transporter (DTX) 0.06 OrthoFinder output from all 47 species
Solyc03g118970.3.1 Solyc03g118970 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Solyc07g008410.4.1 Solyc07g008410 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Solyc10g007073.1.1 ALF5, Solyc10g007073 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Solyc11g010380.2.1 Solyc11g010380 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Solyc12g005850.2.1 Solyc12g005850 metabolite transporter (DTX) 0.06 OrthoFinder output from all 47 species
Solyc12g006360.3.1 TT12, ATTT12,... metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Spa_g00441 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002597_P001 Zm00001e002597 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Zm00001e004788_P001 Zm00001e004788 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Zm00001e012499_P001 Zm00001e012499 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Zm00001e014159_P001 Zm00001e014159 metabolite transporter (DTX) 0.04 OrthoFinder output from all 47 species
Zm00001e028985_P001 Zm00001e028985 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e035104_P001 Zm00001e035104 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 46 206
IPR002528 MATE_fam 268 428
No external refs found!