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  5. Gb_27617

Gb_27617 (ATHEXP ALPHA 1.13,...)


Aliases : ATHEXP ALPHA 1.13, EXPA17, ATEXPA17, ATEXP17

Description : Putative expansin-A17 OS=Arabidopsis thaliana (sp|q9zsi1|exp17_arath : 146.0)


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_27617
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00146900 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.02 OrthoFinder output from all 47 species
AMTR_s00110p00103570 ATEXPA4, ATEXP4,... Expansin-A4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00111p00059150 ATHEXP BETA 1.4,... Putative expansin-B2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.03 OrthoFinder output from all 47 species
AT1G62980 EXPA18, EXP18,... expansin A18 0.03 OrthoFinder output from all 47 species
AT4G01630 ATHEXP ALPHA... expansin A17 0.02 OrthoFinder output from all 47 species
AT4G17030 ATHEXP BETA 3.1,... expansin-like B1 0.02 OrthoFinder output from all 47 species
Aev_g17361 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37610 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40485 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20801 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13184 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39739.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0041.g026744 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=9-821 0.03 OrthoFinder output from all 47 species
Ceric.17G042800.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g15610 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16993 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40575 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06200 EXPA8, ATHEXP... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g24536 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g30387 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46781 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005917001 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01011437001 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01028215001 ATHEXP ALPHA... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Gb_01499 EXP15, ATEXPA15,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Gb_06127 EXP15, ATEXPA15,... alpha-class expansin 0.05 OrthoFinder output from all 47 species
Gb_10700 ATHEXP BETA 3.1,... beta-like-class expansin 0.02 OrthoFinder output from all 47 species
Gb_10702 ATHEXP BETA 3.1,... beta-like-class expansin 0.04 OrthoFinder output from all 47 species
Gb_10703 ATHEXP BETA 3.1,... beta-like-class expansin 0.04 OrthoFinder output from all 47 species
Gb_24808 ATEXLA1, EXPL1,... alpha-like-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os01g16770.1 ATEXPA10,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g01260.1 ATHEXP BETA 1.4,... Expansin-B8 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os03g04020.1 ATEXLA1, EXPL1,... alpha-like-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g06000.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g06020.1 LOC_Os03g06020 alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g21820.1 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os05g39990.1 LOC_Os05g39990 alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os10g40700.1 ATHEXP BETA 1.4,... Expansin-B6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_10299189g0010 EXPA8, ATHEXP... Expansin-A8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_12056g0010 ATEXPA1, EXP1,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_2687768g0010 EXPA8, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
MA_30127g0010 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_36587g0010 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_37884g0010 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_4979g0010 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_78155g0010 EXPB1, ATEXPB1,... Expansin-B17 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_792493g0010 ATEXPA10,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp1g22700.1 EXP15, ATEXPA15,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Mp1g26350.1 ATEXP14, EXPA14,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp2g18600.1 ATEXPA4, ATEXP4,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp4g06560.1 EXPA16, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp5g01930.1 EXPA6, ATEXP6,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Nbi_g28493 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27816 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30057 ATEXPA3, EXP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo78615 ATEXP7, EXPA7,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Solyc01g090810.4.1 ATHEXP BETA 1.4,... Putative expansin-B2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc05g052250.3.1 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Solyc06g060970.2.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Solyc08g007090.3.1 Solyc08g007090 Expansin-like B1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Solyc08g077330.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Solyc08g077900.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.02 OrthoFinder output from all 47 species
Solyc08g077910.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Solyc10g018500.1.1 ATHEXP BETA 1.4,... Putative expansin-B2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g084780.3.1 EXP9, EXPA9,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Solyc12g089380.2.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Spa_g25562 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38498 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000429_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e002337_P001 ATHEXP BETA 1.4,... Expansin-B3 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e004713_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e004716_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e004719_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e014220_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Zm00001e014231_P001 ATEXPA10,... Expansin-A13 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e014247_P001 ATHEXP ALPHA... Expansin-A23 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e017334_P001 ATEXPA10,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e023169_P003 ATHEXP BETA 1.1,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e036693_P001 EXPA18, EXP18,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e036907_P001 ATHEXP BETA 1.4,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e037884_P001 ATHEXP BETA 1.4,... Expansin-B6 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e037885_P001 ATHEXP BETA 1.4,... Expansin-B6 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e038997_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 55 127
No external refs found!