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  5. Gb_28422

Gb_28422


Description : (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana (sp|q9ssm2|mdll_arath : 435.0)


Gene families : OG0000755 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000755_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28422

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00263600 evm_27.TU.AmTr_v1... (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G12570 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 OrthoFinder output from all 47 species
AT3G56060 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 OrthoFinder output from all 47 species
Aop_g28811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s1527.g104149 No alias not classified & original description: CDS=163-1728 0.03 OrthoFinder output from all 47 species
Ceric.10G018600.1 Ceric.10G018600 not classified & original description: pacid=50613331... 0.03 OrthoFinder output from all 47 species
Dde_g28809 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01010648001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01019871001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_00808 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_29960 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_32365 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_39927 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_39928 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g45530.1 LOC_Os02g45530 Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g02700.1 LOC_Os03g02700 Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g48400.1 LOC_Os04g48400 Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g44540.1 LOC_Os06g44540 (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g09532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433135g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10433135g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_11792g0020 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_7181516g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g43877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g45398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019996 No alias not classified & original description: CDS=1-1797 0.03 OrthoFinder output from all 47 species
Smo108291 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo112603 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Smo153538 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo235799 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo404769 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo405960 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo407760 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo422534 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Smo427468 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo429523 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc06g035580.3.1 Solyc06g035580 Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc08g080190.4.1 Solyc08g080190 Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g05899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002156_P001 Zm00001e002156 Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e004200_P002 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.03 OrthoFinder output from all 47 species
Zm00001e007199_P001 Zm00001e007199 Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e015434_P001 Zm00001e015434 Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e033949_P001 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR007867 GMC_OxRtase_C 387 528
IPR000172 GMC_OxRdtase_N 55 330
No external refs found!