1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_28891

Gb_28891 (SRC2, (AT)SRC2)


Aliases : SRC2, (AT)SRC2

Description : BON-interacting Prgrammed Cell Death co-suppressor (BAP)


Gene families : OG0000271 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_28891
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00209740 SRC2, (AT)SRC2,... Protein SRC2 OS=Glycine max 0.05 OrthoFinder output from all 47 species
AT3G16510 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
Ala_g17231 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.03 OrthoFinder output from all 47 species
Als_g44964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14102 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56062.t1 Aspi01Gene56062 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03025 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.02 OrthoFinder output from all 47 species
Ceric.11G051400.1 SRC2, (AT)SRC2,... not classified & original description: pacid=50596485... 0.04 OrthoFinder output from all 47 species
Ceric.23G001500.1 SRC2, (AT)SRC2,... ER-anchored membrane contact site protein *(SRC2) &... 0.01 OrthoFinder output from all 47 species
Dac_g32667 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.03 OrthoFinder output from all 47 species
Dcu_g04309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07782 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_09310 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_28398 SRC2, (AT)SRC2 Protein SRC2 homolog OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_28884 SRC2, (AT)SRC2 BON-interacting Prgrammed Cell Death co-suppressor (BAP) 0.04 OrthoFinder output from all 47 species
Gb_28901 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g47400.1 LOC_Os07g47400 Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 85.9) 0.02 OrthoFinder output from all 47 species
Len_g21649 SRC2, (AT)SRC2 co-suppressor (BAP) of Programmed Cell Death & original... 0.02 OrthoFinder output from all 47 species
Lfl_g38079 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.03 OrthoFinder output from all 47 species
MA_10076142g0010 SRC2, (AT)SRC2 Protein SRC2 homolog OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10427865g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_18179g0010 No alias Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 94.0) 0.04 OrthoFinder output from all 47 species
MA_5321101g0010 SRC2, (AT)SRC2 Protein SRC2 homolog OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_6405951g0010 No alias Protein SRC2 homolog OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_93411g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_9719655g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g08510.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp6g00390.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g18750 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.05 OrthoFinder output from all 47 species
Pir_g47026 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001207 No alias not classified & original description: CDS=1-2559 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0081.g017994 No alias not classified & original description: CDS=1-750 0.05 OrthoFinder output from all 47 species
Smo408999 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc01g005420.2.1 Solyc01g005420 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc01g067000.4.1 Solyc01g067000 Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 132.0) 0.02 OrthoFinder output from all 47 species
Solyc01g099370.3.1 SRC2, (AT)SRC2,... Protein SRC2 homolog OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc11g013250.1.1 Solyc11g013250 Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 92.4) 0.06 OrthoFinder output from all 47 species
Spa_g11023 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.03 OrthoFinder output from all 47 species
Spa_g29309 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.04 OrthoFinder output from all 47 species
Spa_g37397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48893 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.04 OrthoFinder output from all 47 species
Tin_g07202 SRC2, (AT)SRC2 ER-anchored membrane contact site protein *(SRC2) &... 0.04 OrthoFinder output from all 47 species
Zm00001e019101_P001 Zm00001e019101 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e028370_P001 Zm00001e028370 Protein SRC2 OS=Glycine max (sp|o04133|src2_soybn : 105.0) 0.03 OrthoFinder output from all 47 species
Zm00001e031397_P001 SRC2, (AT)SRC2,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 5 106
No external refs found!