1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_29411

Gb_29411 (SAMS3, MTO3, MAT4)


Aliases : SAMS3, MTO3, MAT4

Description : S-adenosyl methionine synthetase


Gene families : OG0000645 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000645_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29411
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00073480 SAM2, MAT2,... Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.03 OrthoFinder output from all 47 species
AT1G02500 MAT1, AtSAM1, SAM1, SAM-1 S-adenosylmethionine synthetase 1 0.08 OrthoFinder output from all 47 species
AT2G36880 MAT3 methionine adenosyltransferase 3 0.08 OrthoFinder output from all 47 species
AT4G01850 SAM2, MAT2, AtSAM2, SAM-2 S-adenosylmethionine synthetase 2 0.12 OrthoFinder output from all 47 species
Adi_g059590 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Aop_g03481 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Aop_g18643 SAMS3, MTO3, MAT4 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Aop_g68673 MAT3 EC_2.5 transferase transferring alkyl or aryl group,... 0.05 OrthoFinder output from all 47 species
Ceric.23G071300.1 SAM2, MAT2,... EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Ceric.23G071400.1 MAT1, AtSAM1,... EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Dac_g03733 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Dcu_g27683 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.06 OrthoFinder output from all 47 species
Ehy_g04512 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
GSVIVT01028205001 SAM2, MAT2, AtSAM2, SAM-2 Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.06 OrthoFinder output from all 47 species
LOC_Os05g04510.1 MAT1, AtSAM1,... S-adenosyl methionine synthetase 0.05 OrthoFinder output from all 47 species
Lfl_g02008 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
MA_197296g0010 SAMS3, MTO3, MAT4 S-adenosyl methionine synthetase 0.06 OrthoFinder output from all 47 species
Nbi_g03548 MAT3 EC_2.5 transferase transferring alkyl or aryl group,... 0.07 OrthoFinder output from all 47 species
Ore_g07372 SAMS3, MTO3, MAT4 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Ppi_g07426 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Ppi_g43372 MAT3 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000669 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Smo155092 SAM2, MAT2, AtSAM2, SAM-2 Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.04 OrthoFinder output from all 47 species
Smo168213 SAM2, MAT2, AtSAM2, SAM-2 Coenzyme metabolism.S-adenosyl methionine (SAM)... 0.03 OrthoFinder output from all 47 species
Solyc09g008280.2.1 MAT3, Solyc09g008280 S-adenosyl methionine synthetase 0.04 OrthoFinder output from all 47 species
Spa_g14825 MAT1, AtSAM1, SAM1, SAM-1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Spa_g14826 SAM2, MAT2, AtSAM2, SAM-2 EC_2.5 transferase transferring alkyl or aryl group,... 0.05 OrthoFinder output from all 47 species
Spa_g20589 SAMS3, MTO3, MAT4 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Spa_g30359 MAT3 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Zm00001e026226_P001 MAT1, AtSAM1,... S-adenosyl methionine synthetase 0.06 OrthoFinder output from all 47 species
Zm00001e040353_P003 SAM2, MAT2,... S-adenosyl methionine synthetase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEA Interproscan
BP GO:0006556 S-adenosylmethionine biosynthetic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0033897 ribonuclease T2 activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022629 S-AdoMet_synt_central 117 238
IPR022628 S-AdoMet_synt_N 4 101
IPR022630 S-AdoMet_synt_C 240 381
No external refs found!