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  5. Gb_29672

Gb_29672 (emb2726)


Aliases : emb2726

Description : EF-Ts translation elongation factor


Gene families : OG0003250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003250_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_29672

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00129480 emb2726,... Protein biosynthesis.organelle translation... 0.08 OrthoFinder output from all 47 species
AT4G29060 emb2726 elongation factor Ts family protein 0.08 OrthoFinder output from all 47 species
Adi_g118105 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Aev_g28882 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Ala_g13148 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Ala_g21504 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Ala_g30187 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Als_g23162 emb2726 translation elongation factor *(EF-Ts) & original... 0.02 OrthoFinder output from all 47 species
Aob_g08834 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Aop_g25286 emb2726 translation elongation factor *(EF-Ts) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene11644.t1 emb2726, Aspi01Gene11644 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0109.g045371 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Cba_g71569 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Ceric.03G081000.1 emb2726, Ceric.03G081000 translation elongation factor *(EF-Ts) & original... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021319.56 emb2726 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Cre12.g519180 emb2726 Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
Dac_g05556 emb2726 translation elongation factor *(EF-Ts) & original... 0.02 OrthoFinder output from all 47 species
Dac_g16809 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Dac_g16810 emb2726 translation elongation factor *(EF-Ts) & original... 0.05 OrthoFinder output from all 47 species
Dde_g06930 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g05564 emb2726 translation elongation factor *(EF-Ts) & original... 0.07 OrthoFinder output from all 47 species
Ehy_g26260 emb2726 translation elongation factor *(EF-Ts) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01015347001 emb2726 Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
LOC_Os12g35630.1 emb2726, LOC_Os12g35630 EF-Ts translation elongation factor 0.05 OrthoFinder output from all 47 species
Len_g59815 emb2726 translation elongation factor *(EF-Ts) & original... 0.05 OrthoFinder output from all 47 species
MA_10436165g0010 emb2726 EF-Ts translation elongation factor 0.08 OrthoFinder output from all 47 species
Mp2g23510.1 emb2726 EF-Ts translation elongation factor 0.03 OrthoFinder output from all 47 species
Msp_g12193 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g14225 emb2726 translation elongation factor *(EF-Ts) & original... 0.07 OrthoFinder output from all 47 species
Ore_g00299 emb2726 translation elongation factor *(EF-Ts) & original... 0.05 OrthoFinder output from all 47 species
Ore_g08953 emb2726 translation elongation factor *(EF-Ts) & original... 0.06 OrthoFinder output from all 47 species
Pir_g42601 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g11907 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g13399 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g29843 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022632 emb2726 translation elongation factor *(EF-Ts) & original... 0.04 OrthoFinder output from all 47 species
Smo60716 emb2726 Protein biosynthesis.organelle translation... 0.08 OrthoFinder output from all 47 species
Solyc07g018360.3.1 emb2726, Solyc07g018360 EF-Ts translation elongation factor 0.04 OrthoFinder output from all 47 species
Spa_g11112 emb2726 translation elongation factor *(EF-Ts) & original... 0.05 OrthoFinder output from all 47 species
Spa_g21728 emb2726 translation elongation factor *(EF-Ts) & original... 0.03 OrthoFinder output from all 47 species
Tin_g03798 emb2726 translation elongation factor *(EF-Ts) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e010912_P001 emb2726, Zm00001e010912 EF-Ts translation elongation factor 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003746 translation elongation factor activity IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 158 227
IPR003029 S1_domain 277 348
IPR014039 Transl_elong_EFTs/EF1B_dimer 995 1135
IPR014039 Transl_elong_EFTs/EF1B_dimer 725 888
No external refs found!