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  5. Gb_30020

Gb_30020 (XI-15, ATXI-I, XI-I)


Aliases : XI-15, ATXI-I, XI-I

Description : class XI myosin microfilament-based motor protein


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30020

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00146p00059560 ATXIK, XI-17,... Cytoskeleton.microfilament network.myosin... 0.03 OrthoFinder output from all 47 species
AT1G17580 ATMYA1, XI-1, MYA1 myosin 1 0.04 OrthoFinder output from all 47 species
AT4G28710 XIH, ATXIH Myosin family protein with Dil domain 0.04 OrthoFinder output from all 47 species
AT5G20490 ATXIK, XI-17, XIK Myosin family protein with Dil domain 0.03 OrthoFinder output from all 47 species
Adi_g055863 XIC, ATXIC class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Adi_g117107 XIC, ATXIC class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Als_g06906 XIC, ATXIC not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21629 XIC, ATXIC class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Als_g30376 ATXIK, XI-17, XIK not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19963 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023600 ATVIIIA, VIIIA not classified & original description: CDS=1-2967 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031356 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Ceric.03G015200.1 ATXIK, XI-17,... class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Ceric.05G063900.1 ATXIK, XI-17,... class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000113.17 XI-16, MYA3,... Myosin-12 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000189.32 ATVIIIA, VIIIA Myosin-7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g08993 XIC, ATXIC class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Dcu_g37414 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.05 OrthoFinder output from all 47 species
Ehy_g21129 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein &... 0.04 OrthoFinder output from all 47 species
GSVIVT01035479001 XI-15, ATXI-I, XI-I Cytoskeleton.microfilament network.myosin... 0.03 OrthoFinder output from all 47 species
LOC_Os02g57190.1 XI-8, XI-B, XIB,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Msp_g13318 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein &... 0.04 OrthoFinder output from all 47 species
Ore_g16120 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.03 OrthoFinder output from all 47 species
Pnu_g13852 XIF, ATMYO5, ATXIF not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g04356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g008090.3.1 XI-6, ATMYA2,... class XI myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Spa_g06967 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.04 OrthoFinder output from all 47 species
Zm00001e004513_P002 ATVIIIA, VIIIA,... class VIII myosin microfilament-based motor protein 0.03 OrthoFinder output from all 47 species
Zm00001e019983_P001 ATXIK, XI-17,... class XI myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species
Zm00001e020540_P002 ATXIK, XI-17,... class XI myosin microfilament-based motor protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 827 845
IPR000048 IQ_motif_EF-hand-BS 899 916
IPR000048 IQ_motif_EF-hand-BS 802 818
IPR000048 IQ_motif_EF-hand-BS 850 868
IPR000048 IQ_motif_EF-hand-BS 779 797
IPR002710 Dilute_dom 1391 1495
IPR004009 Myosin_N 53 87
IPR001609 Myosin_head_motor_dom 106 762
No external refs found!