Description : Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica (sp|q7xtv7|hip1_orysj : 140.0)
Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_30059 | |
| Cluster | HCCA: Cluster_127 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cba_g16820 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g12532 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g10341 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g12443 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19115 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g14320.1 | LOC_Os08g14320 | E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g15773 | No alias | regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g09951 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g24167 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g45513 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo89607 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g006460.3.1 | Solyc08g006460 | Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g05113 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005215 | transporter activity | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0022857 | transmembrane transporter activity | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 89 | 131 |
| No external refs found! |
