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  5. Gb_30146

Gb_30146 (CRR22)


Aliases : CRR22

Description : Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana (sp|q9zuw3|pp172_arath : 607.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30146

Target Alias Description ECC score Gene Family Method Actions
AT2G36980 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G06540 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g075673 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38668 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g29464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015466001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
GSVIVT01023971001 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
Gb_22711 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
LOC_Os03g04390.1 LOC_Os03g04390 Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species
LOC_Os04g39410.1 OTP86, LOC_Os04g39410 RNA editing factor (OTP86) 0.02 OrthoFinder output from all 47 species
Len_g04365 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g28725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03953 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g33818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g37758 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 676 800
IPR002885 Pentatricopeptide_repeat 200 247
IPR002885 Pentatricopeptide_repeat 401 449
IPR002885 Pentatricopeptide_repeat 300 347
IPR002885 Pentatricopeptide_repeat 502 550
IPR002885 Pentatricopeptide_repeat 578 600
No external refs found!