Gb_30742 (TIR1)


Aliases : TIR1

Description : Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana (sp|q570c0|tir1_arath : 232.0)


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30742

Target Alias Description ECC score Gene Family Method Actions
Adi_g005427 AFB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g053952 AFB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076049 AFB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48573 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
Cba_g07454 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ceric.07G073600.1 AFB2, Ceric.07G073600 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
Ehy_g04863 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01021910001 TIR1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01023363001 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_04515 TIR1 Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Gb_04516 TIR1 component TIR1/AFB of auxin receptor complex. component... 0.07 OrthoFinder output from all 47 species
Gb_07237 COI1 Coronatine-insensitive protein homolog 1b OS=Oryza... 0.01 OrthoFinder output from all 47 species
Gb_07238 COI1 Coronatine-insensitive protein homolog 1a OS=Oryza... 0.05 OrthoFinder output from all 47 species
Gb_37967 COI1 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
MA_47869g0020 No alias F-box protein FBX14 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_78902g0010 AFB5 component TIR1/AFB of auxin receptor complex 0.02 OrthoFinder output from all 47 species
MA_92309g0010 TIR1 component TIR1/AFB of auxin receptor complex. component... 0.01 OrthoFinder output from all 47 species
Msp_g15130 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Nbi_g04259 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.05 OrthoFinder output from all 47 species
Nbi_g06279 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019379 COI1 component *(COI) of jasmonic acid receptor complex &... 0.01 OrthoFinder output from all 47 species
Smo75487 AFB1, ATGRH1, GRH1 Phytohormones.jasmonic acid.perception and signal... 0.01 OrthoFinder output from all 47 species
Spa_g18052 COI1 component *(COI) of jasmonic acid receptor complex &... 0.01 OrthoFinder output from all 47 species
Zm00001e026935_P001 COI1, Zm00001e026935 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR041567 COI1_F-box 5 44
IPR041101 Transp_inhibit 64 110
No external refs found!