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  5. Gb_30870

Gb_30870


Description : no hits & (original description: none)


Gene families : OG0001166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30870

Target Alias Description ECC score Gene Family Method Actions
AT2G25460 No alias CONTAINS InterPro DOMAIN/s: C2 calcium-dependent... 0.09 OrthoFinder output from all 47 species
Adi_g011130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05090 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene32181.t1 Aspi01Gene32181 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033618 No alias not classified & original description: CDS=121-2442 0.03 OrthoFinder output from all 47 species
Ceric.12G049000.1 Ceric.12G049000 not classified & original description: pacid=50602417... 0.07 OrthoFinder output from all 47 species
Dac_g11710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016350001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01035860001 No alias No description available 0.07 OrthoFinder output from all 47 species
Lfl_g12724 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10364181g0020 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_958331g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp7g19530.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Nbi_g06790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44178 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g059710.4.1 Solyc08g059710 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g17144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025940_P001 Zm00001e025940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 18 172
No external refs found!