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  5. Gb_30989

Gb_30989


Description : effector receptor (NLR)


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_30989

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00250200 evm_27.TU.AmTr_v1... Disease resistance protein TAO1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00233110 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
AT1G17610 No alias Disease resistance protein (TIR-NBS class) 0.02 OrthoFinder output from all 47 species
AT1G31540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G72890 No alias Disease resistance protein (TIR-NBS class) 0.03 OrthoFinder output from all 47 species
AT2G16870 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT4G16857 No alias No description available 0.03 OrthoFinder output from all 47 species
AT4G16920 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G38340 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G46470 RPS6 disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G46500 No alias BEST Arabidopsis thaliana protein match is: disease... 0.04 OrthoFinder output from all 47 species
AT5G46520 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
AT5G58120 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
Adi_g019390 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32850 LAZ5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11382 RPP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23547 LAZ5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08803 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01020123001 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
GSVIVT01020980001 No alias External stimuli response.biotic stress.pathogen... 0.03 OrthoFinder output from all 47 species
GSVIVT01026003001 No alias External stimuli response.biotic stress.pathogen... 0.04 OrthoFinder output from all 47 species
Gb_14946 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_18066 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_20301 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
Gb_25646 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Gb_27878 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
Gb_31442 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_32215 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Gb_33283 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_10234708g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10324896g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10428235g0010 No alias Disease resistance protein TAO1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10429769g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10430523g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.04 OrthoFinder output from all 47 species
MA_10432315g0010 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
MA_10432451g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10433003g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10433845g0020 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_10435505g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_12334g0020 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_128084g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_131802g0030 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_180319g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_191084g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_2938841g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_36510g0030 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_450622g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_5740022g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_612059g0010 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_8647715g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_9009317g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_908452g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_9873718g0020 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Nbi_g23825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g25659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g30870 MEKK4, ATWRKY19,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g46310 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_30410V3.1 Pp3c4_30410 Disease resistance protein (TIR-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
Solyc04g007320.3.1 Solyc04g007320 effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Solyc11g011350.3.1 Solyc11g011350 effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
Solyc12g097000.2.1 Solyc12g097000 effector receptor (NLR) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 22 190
IPR002182 NB-ARC 203 433
No external refs found!