Description : SSU processome assembly factor (UTP10)
Gene families : OG0003994 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003994_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00111p00089410 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | OrthoFinder output from all 47 species | |
| AT3G06530 | No alias | ARM repeat superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g117341 | No alias | SSU processome assembly factor *(UTP10) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.35G057300.1 | Ceric.35G057300 | SSU processome assembly factor *(UTP10) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07784 | No alias | SSU processome assembly factor *(UTP10) & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01013976001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g46310.1 | LOC_Os04g46310 | SSU processome assembly factor (UTP10) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g18330 | No alias | SSU processome assembly factor *(UTP10) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g15147 | No alias | SSU processome assembly factor *(UTP10) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g04467 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g40580 | No alias | SSU processome assembly factor *(UTP10) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g26502 | No alias | SSU processome assembly factor *(UTP10) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e016831_P001 | Zm00001e016831 | SSU processome assembly factor (UTP10) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0005049 | nuclear export signal receptor activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR012954 | BP28_C_dom | 487 | 660 |
| No external refs found! |
