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  5. Gb_33050

Gb_33050 (YCF5)


Aliases : YCF5

Description : assembly factor CcsA of CCS cytochrome f/c6 maturation system (system II)


Gene families : OG0008998 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008998_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33050

Target Alias Description ECC score Gene Family Method Actions
ATCG01040 YCF5 Cytochrome C assembly protein 0.17 OrthoFinder output from all 47 species
Aev_g47212 YCF5 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.23 OrthoFinder output from all 47 species
Aob_g08809 YCF5 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Cba_g78789 YCF5 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.09 OrthoFinder output from all 47 species
Ceric.01G044100.1 YCF5, Ceric.01G044100 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.08 OrthoFinder output from all 47 species
Ceric.05G043800.1 YCF5, Ceric.05G043800 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.1 OrthoFinder output from all 47 species
Ceric.05G046400.1 YCF5, Ceric.05G046400 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.07 OrthoFinder output from all 47 species
Ceric.18G053700.1 YCF5, Ceric.18G053700 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.14 OrthoFinder output from all 47 species
Ceric.19G029400.1 YCF5, Ceric.19G029400 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Ceric.35G068700.1 YCF5, Ceric.35G068700 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Ceric.39G055700.1 YCF5, Ceric.39G055700 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
GSVIVT01004975001 YCF5 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.11 OrthoFinder output from all 47 species
LOC_Os06g46434.1 YCF5, LOC_Os06g46434 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.19 OrthoFinder output from all 47 species
Lfl_g37809 YCF5 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.12 OrthoFinder output from all 47 species
Nbi_g17271 YCF5 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Solyc00g500194.1.1 YCF5, Solyc00g500194 Cytochrome c biogenesis protein CcsA OS=Solanum... 0.14 OrthoFinder output from all 47 species
Solyc08g022180.1.1 YCF5, Solyc08g022180 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.15 OrthoFinder output from all 47 species
Solyc11g021210.2.1 YCF5, Solyc11g021210 assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0017004 cytochrome complex assembly IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR002541 Cyt_c_assembly 24 97
No external refs found!