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  5. Gb_33439

Gb_33439 (REME1)


Aliases : REME1

Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 602.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33439

Target Alias Description ECC score Gene Family Method Actions
Als_g05133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61086 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23475 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68130 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene39631.t1 CRR2, Aspi01Gene39631 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene64478.t1 EMB2758, Aspi01Gene64478 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene66061.t1 Aspi01Gene66061 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009143 No alias not classified & original description: CDS=1-4677 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g013865 No alias not classified & original description: CDS=1-1626 0.02 OrthoFinder output from all 47 species
Azfi_s0082.g038719 No alias not classified & original description: CDS=1-2307 0.02 OrthoFinder output from all 47 species
Ceric.01G127500.1 EMB2744, Ceric.01G127500 not classified & original description: pacid=50592115... 0.03 OrthoFinder output from all 47 species
Ceric.09G024000.1 EMB2261, Ceric.09G024000 not classified & original description: pacid=50587738... 0.07 OrthoFinder output from all 47 species
Ceric.23G075300.1 Ceric.23G075300 not classified & original description: pacid=50609898... 0.01 OrthoFinder output from all 47 species
Dac_g30166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30281 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16808 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g35743 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g44055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009974001 No alias Pentatricopeptide repeat-containing protein At3g26540... 0.03 OrthoFinder output from all 47 species
GSVIVT01017989001 LOI1, MEF11 RNA processing.organelle machineries.RNA... 0.06 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.02 OrthoFinder output from all 47 species
Len_g03339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g38083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54328 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05976 OTP82 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g07382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12140 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40177 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g11487 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g18215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21416 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20422 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23638 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g02370 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g06449 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g30175 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34877 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Pir_g46859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63739 DOT4 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g65757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g16145 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16169 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18373 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g33756 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04648 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05784 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g05912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22095 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31446 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52993 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53961 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002764 No alias not classified & original description: CDS=1-2754 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025587 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Smo118230 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Smo126194 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
Smo5521 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.02 OrthoFinder output from all 47 species
Solyc01g095160.3.1 Solyc01g095160 Pentatricopeptide repeat-containing protein At4g37170... 0.04 OrthoFinder output from all 47 species
Solyc03g114010.3.1 Solyc03g114010 Pentatricopeptide repeat-containing protein At2g29760,... 0.2 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.05 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.12 OrthoFinder output from all 47 species
Solyc10g005090.3.1 Solyc10g005090 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Spa_g04185 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05998 REME1 not classified & original description: none 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 335 382
IPR002885 Pentatricopeptide_repeat 436 483
IPR002885 Pentatricopeptide_repeat 203 251
IPR032867 DYW_dom 609 662
IPR002885 Pentatricopeptide_repeat 301 332
IPR002885 Pentatricopeptide_repeat 410 435
IPR002885 Pentatricopeptide_repeat 143 173
IPR002885 Pentatricopeptide_repeat 81 111
IPR002885 Pentatricopeptide_repeat 174 202
IPR002885 Pentatricopeptide_repeat 576 605
IPR002885 Pentatricopeptide_repeat 511 536
IPR002885 Pentatricopeptide_repeat 50 79
IPR002885 Pentatricopeptide_repeat 112 142
IPR002885 Pentatricopeptide_repeat 19 45
No external refs found!