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  5. Gb_33714

Gb_33714 (ATNCED9, NCED9)


Aliases : ATNCED9, NCED9

Description : carotenoid cleavage dioxygenase (CCD4). neoxanthin cleavage protein


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_33714

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00256590 CCD4, NCED4,... Zeaxanthin 7,8(7,8)-cleavage dioxygenase, chromoplastic... 0.03 OrthoFinder output from all 47 species
AMTR_s00011p00256600 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT1G30100 ATNCED5, NCED5 nine-cis-epoxycarotenoid dioxygenase 5 0.02 OrthoFinder output from all 47 species
Ala_g26552 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Aop_g25800 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.09 OrthoFinder output from all 47 species
Azfi_s0010.g012346 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ceric.06G077400.1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ceric.20G015800.1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ceric.35G030200.1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Dac_g39217 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Dde_g28937 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Gb_04986 CCD4, NCED4 carotenoid cleavage dioxygenase (CCD4) 0.05 OrthoFinder output from all 47 species
Gb_40717 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_41235 CCD4, NCED4 carotenoid cleavage dioxygenase (CCD4) 0.04 OrthoFinder output from all 47 species
LOC_Os12g44310.1 ATCCD1, CCD1,... carotenoid cleavage dioxygenase (CCD1) 0.02 OrthoFinder output from all 47 species
Len_g58979 ATNCED9, NCED9 EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Len_g59432 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
MA_10425950g0020 CCD4, NCED4 Probable carotenoid cleavage dioxygenase 4,... 0.05 OrthoFinder output from all 47 species
MA_450285g0010 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus... 0.03 OrthoFinder output from all 47 species
MA_90573g0010 CCD4, NCED4 carotenoid cleavage dioxygenase (CCD4) 0.05 OrthoFinder output from all 47 species
Mp3g20700.1 ATNCED5, NCED5 neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species
Msp_g38713 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Nbi_g20580 ATCCD1, CCD1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29309 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Ppi_g43883 CCD4, NCED4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30410 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Solyc05g053530.1.1 NCED6, ATNCED6,... neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species
Solyc08g075480.4.1 CCD4, NCED4,... carotenoid cleavage dioxygenase (CCD4) 0.03 OrthoFinder output from all 47 species
Zm00001e032833_P001 ATNCED9, NCED9,... neoxanthin cleavage protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 135 613
No external refs found!