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  5. Gb_34121

Gb_34121 (ATEXPA4, ATEXP4,...)


Aliases : ATEXPA4, ATEXP4, EXPA4, ATHEXP ALPHA 1.6

Description : alpha-class expansin


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_34121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270650 ATEXPA11, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
AMTR_s00002p00195390 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.02 OrthoFinder output from all 47 species
AMTR_s00009p00266410 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.beta-type expansin 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00264980 ATEXPA1, EXP1,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00153780 ATEXPA20,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
AMTR_s00111p00059150 ATHEXP BETA 1.4,... Putative expansin-B2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G40610 EXPA8, ATHEXP... expansin A8 0.03 OrthoFinder output from all 47 species
AT4G01630 ATHEXP ALPHA... expansin A17 0.03 OrthoFinder output from all 47 species
Aev_g21084 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00435.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G048600.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g43609 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23857 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004595001 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01005917001 ATHEXP BETA 3.1,... Cell wall.cell wall proteins.expansins.beta-like-type expansin 0.03 OrthoFinder output from all 47 species
Gb_01499 EXP15, ATEXPA15,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Gb_01501 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_10700 ATHEXP BETA 3.1,... beta-like-class expansin 0.02 OrthoFinder output from all 47 species
Gb_29324 ATEXLA1, EXPL1,... alpha-like-class expansin 0.04 OrthoFinder output from all 47 species
LOC_Os03g01260.1 ATHEXP BETA 1.4,... Expansin-B8 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os03g06000.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g06020.1 LOC_Os03g06020 alpha-class expansin 0.03 OrthoFinder output from all 47 species
Lfl_g27479 EXPB3, ATEXPB3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_100868g0010 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp1g22700.1 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp1g24230.1 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Mp1g26350.1 ATEXP14, EXPA14,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Mp4g22180.1 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Nbi_g28493 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45904 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47012 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004587 ATEXPA10,... alpha-class expansin & original description: CDS=259-1032 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019977 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=392-1180 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022152 EXPB3, ATEXPB3,... not classified & original description: CDS=169-1023 0.02 OrthoFinder output from all 47 species
Sam_g15939 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Smo90332 ATEXPA3, EXP3,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Solyc08g077900.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Solyc08g077910.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Solyc10g084780.3.1 EXP9, EXPA9,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e023169_P003 ATHEXP BETA 1.1,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e036860_P001 ATHEXP BETA 1.4,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 180 267
IPR007117 Expansin_CBD 278 355
No external refs found!