Gb_34443 (ATP1)

Aliases : ATP1

Description : ATP synthase subunit alpha, mitochondrial OS=Oryza sativa (sp|p0c520|atpam_orysa : 669.0)

Gene families : OG0001376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001376_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_34443
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
AT2G07698	No alias	ATPase, F1 complex, alpha subunit protein	0.1	OrthoFinder output from all 47 species
ATCG00120	ATPA	ATP synthase subunit alpha	0.04	OrthoFinder output from all 47 species
ATMG01190	ATP1	ATP synthase subunit 1	0.14	OrthoFinder output from all 47 species
Aev_g01324	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.1	OrthoFinder output from all 47 species
Aev_g20803	ATP1	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.11	OrthoFinder output from all 47 species
Ala_g00134	ATP1	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Ala_g15530	ATP1	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Als_g39057	ATP1	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Aob_g07700	ATP1	not classified & original description: none	0.17	OrthoFinder output from all 47 species
Aop_g15372	ATP1	not classified & original description: none	0.13	OrthoFinder output from all 47 species
Aspi01Gene03341.t2	ATP1, Aspi01Gene03341	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g02611	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Cba_g17152	ATP1	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.06	OrthoFinder output from all 47 species
Ceric.01G056900.1	ATPA, Ceric.01G056900	not classified & original description: pacid=50591476...	0.1	OrthoFinder output from all 47 species
Ceric.01G105100.1	ATPA, Ceric.01G105100	not classified & original description: pacid=50591645...	0.09	OrthoFinder output from all 47 species
Ceric.03G088300.1	ATP1, Ceric.03G088300	not classified & original description: pacid=50573201...	0.05	OrthoFinder output from all 47 species
Ceric.09G009300.1	ATPA, Ceric.09G009300	not classified & original description: pacid=50588520...	0.07	OrthoFinder output from all 47 species
Ceric.19G010500.1	ATPA, Ceric.19G010500	not classified & original description: pacid=50575425...	0.09	OrthoFinder output from all 47 species
Ceric.1Z117200.1	ATPA, Ceric.1Z117200	not classified & original description: pacid=50577000...	0.05	OrthoFinder output from all 47 species
Ceric.1Z126000.1	ATP1, Ceric.1Z126000	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.07	OrthoFinder output from all 47 species
Ceric.1Z215100.1	ATP1, Ceric.1Z215100	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.08	OrthoFinder output from all 47 species
Ceric.1Z240900.1	ATP1, Ceric.1Z240900	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.1	OrthoFinder output from all 47 species
Ceric.1Z297100.1	ATP1, Ceric.1Z297100	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.08	OrthoFinder output from all 47 species
Ceric.1Z313800.1	ATP1, Ceric.1Z313800	not classified & original description: pacid=50567673...	0.05	OrthoFinder output from all 47 species
Ceric.24G015500.1	ATP1, Ceric.24G015500	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.03	OrthoFinder output from all 47 species
Ceric.29G005300.1	ATPA, Ceric.29G005300	not classified & original description: pacid=50625733...	0.08	OrthoFinder output from all 47 species
Ceric.29G005400.1	ATPA, Ceric.29G005400	not classified & original description: pacid=50625214...	0.08	OrthoFinder output from all 47 species
Ceric.38G027200.1	ATP1, Ceric.38G027200	not classified & original description: pacid=50579504...	0.05	OrthoFinder output from all 47 species
Ceric.38G027500.1	ATP1, Ceric.38G027500	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.06	OrthoFinder output from all 47 species
Cre02.g116750	ATP1	Cellular respiration.oxidative phosphorylation.ATP...	0.03	OrthoFinder output from all 47 species
Dcu_g25661	ATP1	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.09	OrthoFinder output from all 47 species
Dde_g22157	ATP1	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.07	OrthoFinder output from all 47 species
GSVIVT01002448001	ATP1	ATP synthase subunit alpha, mitochondrial OS=Helianthus annuus	0.04	OrthoFinder output from all 47 species
Gb_03832	ATP1	ATP synthase subunit alpha, mitochondrial OS=Zea mays...	0.04	OrthoFinder output from all 47 species
Gb_23670	No alias	ATP synthase subunit alpha, mitochondrial OS=Marchantia...	0.12	OrthoFinder output from all 47 species
LOC_Os01g08350.1	ATP1, LOC_Os01g08350	ATP synthase subunit alpha, mitochondrial OS=Oryza...	0.08	OrthoFinder output from all 47 species
LOC_Os04g16740.1	ATPA, LOC_Os04g16740	subunit alpha of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
LOC_Os09g08880.1	ATPA, LOC_Os09g08880	ATP synthase subunit alpha, chloroplastic OS=Oryza...	0.1	OrthoFinder output from all 47 species
LOC_Os09g08910.1	ATP1, LOC_Os09g08910	subunit alpha of ATP synthase peripheral MF1 subcomplex	0.12	OrthoFinder output from all 47 species
LOC_Os10g21240.1	ATPA, LOC_Os10g21240	subunit alpha of peripheral CF1 subcomplex of ATP...	0.05	OrthoFinder output from all 47 species
LOC_Os12g23630.1	LOC_Os12g23630	ATP synthase subunit alpha, mitochondrial OS=Phaseolus...	0.09	OrthoFinder output from all 47 species
Len_g18897	ATP1	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.06	OrthoFinder output from all 47 species
Lfl_g02090	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.05	OrthoFinder output from all 47 species
Lfl_g37428	ATP1	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.05	OrthoFinder output from all 47 species
Mp4g16390.1	ATP1	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Mp5g21420.1	ATPA	ATP synthase subunit alpha, chloroplastic OS=Marchantia...	0.02	OrthoFinder output from all 47 species
Nbi_g14741	ATP1	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.15	OrthoFinder output from all 47 species
Ore_g20650	ATPA	subunit alpha of peripheral CF1 subcomplex of ATP...	0.04	OrthoFinder output from all 47 species
Pir_g15028	ATP1	not classified & original description: none	0.11	OrthoFinder output from all 47 species
Pir_g64497	ATP1	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Ppi_g59281	ATP1	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003503	ATPA	not classified & original description: CDS=1-624	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s2240.g028298	ATPA	not classified & original description: CDS=1-471	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s2240.g028299	ATPA	not classified & original description: CDS=1-399	0.03	OrthoFinder output from all 47 species
Sam_g45092	No alias	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.17	OrthoFinder output from all 47 species
Solyc00g500345.1.1	ATP1, Solyc00g500345	subunit alpha of ATP synthase peripheral MF1 subcomplex	0.07	OrthoFinder output from all 47 species
Solyc00g500358.1.1	ATP1, Solyc00g500358	subunit alpha of ATP synthase peripheral MF1 subcomplex	0.07	OrthoFinder output from all 47 species
Solyc02g012000.1.1	ATPA, Solyc02g012000	ATP synthase subunit alpha, chloroplastic OS=Solanum...	0.03	OrthoFinder output from all 47 species
Solyc02g012010.3.1	ATPA, Solyc02g012010	ATP synthase subunit alpha, plastid OS=Cuscuta reflexa...	0.02	OrthoFinder output from all 47 species
Spa_g14018	ATP1	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.08	OrthoFinder output from all 47 species
Tin_g46151	ATP1	subunit alpha of ATP synthase peripheral MF1 subcomplex...	0.08	OrthoFinder output from all 47 species
Zm00001e042115_P001	ATP1, Zm00001e042115	subunit alpha of ATP synthase peripheral MF1 subcomplex	0.07	OrthoFinder output from all 47 species
Zm00001e042503_P001	ATP1, Zm00001e042503	subunit alpha of ATP synthase peripheral MF1 subcomplex	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006164	purine nucleotide biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006754	ATP biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009142	nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009152	purine ribonucleotide biosynthetic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015986	proton motive force-driven ATP synthesis	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	IEA	Interproscan
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072522	purine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1902600	proton transmembrane transport	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
CC	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
MF	GO:0015002	obsolete heme-copper terminal oxidase activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000793	ATP_synth_asu_C	861	957
IPR000477	RT_dom	6	201
IPR000194	ATPase_F1/V1/A1_a/bsu_nucl-bd	630	854
IPR004100	ATPase_F1/V1/A1_a/bsu_N	554	599

External Links

No external refs found!

Gb_34443 (ATP1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation