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Gb_35180


Description : Probable calcium-binding protein CML25 OS=Arabidopsis thaliana (sp|q9fyk2|cml25_arath : 136.0)


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_35180

Target Alias Description ECC score Gene Family Method Actions
AT2G41410 No alias Calcium-binding EF-hand family protein 0.05 OrthoFinder output from all 47 species
AT3G03400 No alias EF hand calcium-binding protein family 0.02 OrthoFinder output from all 47 species
AT5G17480 APC1, PC1 pollen calcium-binding protein 1 0.03 OrthoFinder output from all 47 species
Adi_g057946 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g13116 No alias calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g27911 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00276 No alias calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os01g72080.1 LOC_Os01g72080 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g72100.1 LOC_Os01g72100 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.1 OrthoFinder output from all 47 species
LOC_Os05g31620.1 LOC_Os05g31620 Probable calcium-binding protein CML15 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os11g04560.1 LOC_Os11g04560 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g22348 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g14930.1 CML23 Probable calcium-binding protein CML23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Ore_g04785 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g21746 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27720 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g27721 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g118810.1.1 Solyc03g118810 Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.02 OrthoFinder output from all 47 species
Solyc04g018110.1.1 Solyc04g018110 Probable calcium-binding protein CML35 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g10112 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e018643_P001 Zm00001e018643 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Zm00001e026863_P001 Zm00001e026863 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 186 249
IPR002048 EF_hand_dom 113 172
No external refs found!