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  5. Gb_36007

Gb_36007


Description : component psRPL17 of large ribosomal subunit proteome


Gene families : OG0002243 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002243_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36007

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00185050 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
AT3G54210 No alias Ribosomal protein L17 family protein 0.16 OrthoFinder output from all 47 species
Ala_g36982 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Als_g08091 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Als_g32904 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aop_g05075 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Azfi_s0132.g049286 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Ceric.31G010800.1 Ceric.31G010800 component *(bL17c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Cre02.g108850 No alias Protein biosynthesis.organelle translation... 0.11 OrthoFinder output from all 47 species
Dac_g01223 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Dcu_g23921 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Dde_g06743 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ehy_g03225 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01037929001 No alias Protein biosynthesis.organelle translation... 0.09 OrthoFinder output from all 47 species
LOC_Os03g60100.1 LOC_Os03g60100 component psRPL17 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Lfl_g00441 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Lfl_g31145 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
MA_263166g0010 No alias 50S ribosomal protein L17, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp8g05860.1 No alias component psRPL17 of large ribosomal subunit proteome 0.15 OrthoFinder output from all 47 species
Nbi_g05141 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ore_g05442 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ore_g31023 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Pp3c12_10340V3.1 Pp3c12_10340 Ribosomal protein L17 family protein 0.07 OrthoFinder output from all 47 species
Pp3c13_21730V3.1 Pp3c13_21730 Ribosomal protein L17 family protein 0.05 OrthoFinder output from all 47 species
Pp3c3_12090V3.1 Pp3c3_12090 Ribosomal protein L17 family protein 0.05 OrthoFinder output from all 47 species
Ppi_g06649 No alias component *(uL17m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g015014 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Solyc06g082750.3.1 Solyc06g082750 component psRPL17 of large ribosomal subunit proteome 0.15 OrthoFinder output from all 47 species
Solyc06g082760.4.1 Solyc06g082760 component psRPL17 of large ribosomal subunit proteome 0.15 OrthoFinder output from all 47 species
Spa_g04290 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Spa_g04291 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Tin_g03061 No alias component *(bL17c) of large plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Zm00001e011784_P001 Zm00001e011784 component psRPL17 of large ribosomal subunit proteome 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR000456 Ribosomal_L17 111 207
No external refs found!