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  5. Gb_36072

Gb_36072


Description : effector receptor (NLR)


Gene families : OG0000030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36072
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT1G56540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT1G63750 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G22690 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G41540 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 OrthoFinder output from all 47 species
AT5G41750 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G58120 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
Ala_g31828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48806.t1 Aspi01Gene48806 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51888 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_14963 No alias effector receptor (NLR) 0.04 OrthoFinder output from all 47 species
MA_10097127g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_10204399g0010 No alias effector receptor (NLR) 0.02 OrthoFinder output from all 47 species
MA_10430523g0010 No alias TMV resistance protein N OS=Nicotiana glutinosa... 0.03 OrthoFinder output from all 47 species
MA_10432202g0030 No alias effector receptor (NLR) 0.05 OrthoFinder output from all 47 species
MA_10434398g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_12334g0020 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_143311g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_212397g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
MA_2938841g0010 No alias effector receptor (NLR) 0.03 OrthoFinder output from all 47 species
Pir_g29887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37315 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38153 No alias effector receptor *(NLR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52099 No alias effector receptor *(NLR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g102840.3.1 Solyc01g102840 effector receptor (NLR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP HCCA
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009187 cyclic nucleotide metabolic process IEP HCCA
BP GO:0009190 cyclic nucleotide biosynthetic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 238 450
IPR000157 TIR_dom 41 189
No external refs found!