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  5. Gb_36115

Gb_36115 (TTL1)


Aliases : TTL1

Description : scaffold protein (TTL) of brassinosteroid signalling


Gene families : OG0000939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000939_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36115
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00174p00014780 TTL3, VIT,... Inactive TPR repeat-containing thioredoxin TTL3... 0.02 OrthoFinder output from all 47 species
AT1G78120 TPR12 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G58620 TTL4 tetratricopetide-repeat thioredoxin-like 4 0.03 OrthoFinder output from all 47 species
Aev_g14282 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26452 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32635 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09492 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09603 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10921 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34061.t1 TTL1, Aspi01Gene34061 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0039.g026488 TTL1 not classified & original description: CDS=268-3219 0.03 OrthoFinder output from all 47 species
Azfi_s0413.g068595 TTL1 not classified & original description: CDS=1-2694 0.03 OrthoFinder output from all 47 species
Cba_g14242 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g27581 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G088900.1 TTL3, VIT,... not classified & original description: pacid=50584923... 0.04 OrthoFinder output from all 47 species
Ceric.27G040400.1 TTL3, VIT,... not classified & original description: pacid=50605732... 0.04 OrthoFinder output from all 47 species
Dac_g14546 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22529 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005875001 TPR14 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01009014001 TPR14 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01014216001 TTL1 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01020699001 TTL3, VIT Inactive TPR repeat-containing thioredoxin TTL3... 0.03 OrthoFinder output from all 47 species
LOC_Os05g11990.1 TTL1, LOC_Os05g11990 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os05g50990.1 TTL4, LOC_Os05g50990 scaffold protein (TTL) of brassinosteroid signalling 0.03 OrthoFinder output from all 47 species
Len_g08161 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09089 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426265g0010 TTL1 scaffold protein (TTL) of brassinosteroid signalling 0.06 OrthoFinder output from all 47 species
Mp6g04200.1 TTL1 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Msp_g32641 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35116 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07534 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29036 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07135 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01359 TTL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g02414 TTL1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g06996 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17078 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001174 TTL1 not classified & original description: CDS=524-3337 0.02 OrthoFinder output from all 47 species
Sam_g13862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo168306 TTL1 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc07g062580.4.1 TTL1, Solyc07g062580 scaffold protein (TTL) of brassinosteroid signalling 0.03 OrthoFinder output from all 47 species
Spa_g04571 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09257 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g16173 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16528 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10854 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11229 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14806 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023863_P001 TPR14, Zm00001e023863 Inactive TPR repeat-containing thioredoxin TTL3... 0.02 OrthoFinder output from all 47 species
Zm00001e026052_P001 TTL1, Zm00001e026052 scaffold protein (TTL) of brassinosteroid signalling 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001440 TPR_1 760 793
IPR013766 Thioredoxin_domain 861 948
No external refs found!