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  5. Gb_36677

Gb_36677


Description : G2-like GARP transcription factor


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36677
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00063460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AT4G17695 KAN3 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g088819 KAN, KAN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene21883.t1 Aspi01Gene21883 transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21948.t1 Aspi01Gene21948 transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.32G050900.1 Ceric.32G050900 transcription factor *(CLAUSA) & original description:... 0.07 OrthoFinder output from all 47 species
Dac_g27743 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08284 KAN4, ATS KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030315001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.12 OrthoFinder output from all 47 species
GSVIVT01032776001 No alias Putative Myb family transcription factor At1g14600... 0.12 OrthoFinder output from all 47 species
GSVIVT01036717001 APL, WDY RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Gb_05469 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os04g56990.1 LOC_Os04g56990 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Lfl_g05894 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g40003 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g03481 KAN3 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09762 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g18879 KAN2 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05575 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g41633 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010896 No alias transcription factor *(CLAUSA) & original description: CDS=80-784 0.04 OrthoFinder output from all 47 species
Solyc03g006150.2.1 Solyc03g006150 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Solyc09g091880.4.1 Solyc09g091880 G2-like GARP transcription factor. transcription factor (PHR1) 0.04 OrthoFinder output from all 47 species
Solyc10g080460.2.1 Solyc10g080460 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Zm00001e005797_P001 KAN4, ATS, Zm00001e005797 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e007585_P001 Zm00001e007585 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e030689_P002 Zm00001e030689 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 219 269
No external refs found!