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  5. Gb_36775

Gb_36775


Description : Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana (sp|q9lic3|pp227_arath : 441.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36775

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00075660 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.05 OrthoFinder output from all 47 species
AMTR_s00025p00218280 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00127300 MEF22,... Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
AMTR_s00587p00011650 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G47840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G49710 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G01030 No alias pentatricopeptide (PPR) repeat-containing protein 0.04 OrthoFinder output from all 47 species
AT4G18520 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G25270 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G39530 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04532 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g08884 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12477 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16615 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17004 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17219 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22597 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g23936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26367 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30861 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g34624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36515 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g61738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g10709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27898 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g41640 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07836.t1 REME1, Aspi01Gene07836 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22290.t1 Aspi01Gene22290 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28168.t1 Aspi01Gene28168 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31776.t1 Aspi01Gene31776 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34785.t1 Aspi01Gene34785 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41783.t2 Aspi01Gene41783 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45795.t1 Aspi01Gene45795 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69669.t1 CRR22, Aspi01Gene69669 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0043.g027128 No alias not classified & original description: CDS=146-1684 0.04 OrthoFinder output from all 47 species
Azfi_s0059.g034666 No alias not classified & original description: CDS=1-1770 0.04 OrthoFinder output from all 47 species
Azfi_s1835.g107332 CRR22 not classified & original description: CDS=1-2094 0.04 OrthoFinder output from all 47 species
Cba_g34541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G087600.1 OTP84, Ceric.11G087600 not classified & original description: pacid=50595872... 0.03 OrthoFinder output from all 47 species
Dac_g05441 RARE1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g10056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27771 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30474 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dac_g35459 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g39511 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08946 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23389 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g10840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16081 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21664 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22351 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23999 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g48000 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12053 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12280 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24574 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g29800.1 LOC_Os06g29800 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.03 OrthoFinder output from all 47 species
Len_g36973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15182 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40188 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_153011g0010 MEF1 RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
MA_59599g0010 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
MA_6329g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Msp_g37918 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41129 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23298 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07471 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26309 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13367 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37149 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g46864 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63890 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g23109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27694 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10335 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g21699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g35387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53979 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61267 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003168 CRR22 not classified & original description: CDS=1-2031 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004758 No alias not classified & original description: CDS=1-2223 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007436 No alias not classified & original description: CDS=1-1323 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026002 No alias not classified & original description: CDS=74-2389 0.06 OrthoFinder output from all 47 species
Sam_g30157 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo118230 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Smo96927 EMB2758 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
Solyc11g006700.1.1 Solyc11g006700 Pentatricopeptide repeat-containing protein At5g04780,... 0.04 OrthoFinder output from all 47 species
Spa_g07192 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24963 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g44644 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56457 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56476 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35293 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013166_P001 Zm00001e013166 Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
Zm00001e016542_P001 Zm00001e016542 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 400 424
IPR002885 Pentatricopeptide_repeat 300 322
IPR002885 Pentatricopeptide_repeat 467 494
IPR002885 Pentatricopeptide_repeat 253 266
IPR002885 Pentatricopeptide_repeat 225 252
IPR002885 Pentatricopeptide_repeat 149 197
IPR002885 Pentatricopeptide_repeat 325 374
IPR032867 DYW_dom 484 576
No external refs found!