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  5. Gb_36996

Gb_36996 (MOS7)


Aliases : MOS7

Description : NUP88 scaffold nucleoporin of nuclear pore complex


Gene families : OG0005687 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_36996
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AT5G05680 MOS7 nuclear pore complex protein-related 0.02 OrthoFinder output from all 47 species
Ceric.22G059800.1 MOS7, Ceric.22G059800 scaffold nucleoporin of nuclear pore complex *(NUP88) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021493.16 MOS7 No description available 0.01 OrthoFinder output from all 47 species
Cre06.g278900 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01032835001 MOS7 Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
LOC_Os04g51900.1 MOS7, LOC_Os04g51900 NUP88 scaffold nucleoporin of nuclear pore complex 0.06 OrthoFinder output from all 47 species
Mp1g06510.1 MOS7 NUP88 scaffold nucleoporin of nuclear pore complex 0.06 OrthoFinder output from all 47 species
Spa_g08998 MOS7 scaffold nucleoporin of nuclear pore complex *(NUP88) &... 0.03 OrthoFinder output from all 47 species
Tin_g10176 MOS7 scaffold nucleoporin of nuclear pore complex *(NUP88) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR019321 Nucleoporin_Nup88 166 506
No external refs found!