Description : transcription factor (bHLH)
Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_37017 | |
| Cluster | HCCA: Cluster_119 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00106p00127480 | UNE10,... | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03333 | No alias | regulatory protein (CIB) of blue light perception &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g22777 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g32490 | RSL2 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g32598 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g06129 | PIL5, PIF1 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g21461 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g29687 | PIL5, PIF1 | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01018164001 | UNE10 | Transcription factor UNE10 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01018165001 | UNE10 | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01028516001 | PIL5, PIF1 | External stimuli response.light.red/far red light.PIF... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10435000g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g18910.1 | HEC1 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g11151 | LRL3 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19546 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g33206 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g43162 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
| Smo405220 | HEC1 | RNA biosynthesis.transcriptional activation.bHLH... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g010170.2.1 | LRL1, Solyc12g010170 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g39546 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| MF | GO:0008134 | transcription factor binding | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| BP | GO:0010035 | response to inorganic substance | IEP | HCCA |
| BP | GO:0010167 | response to nitrate | IEP | HCCA |
| BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
| BP | GO:0015706 | nitrate transmembrane transport | IEP | HCCA |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
| MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0017025 | TBP-class protein binding | IEP | HCCA |
| BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
| BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098661 | inorganic anion transmembrane transport | IEP | HCCA |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | HCCA |
| BP | GO:1901698 | response to nitrogen compound | IEP | HCCA |
| BP | GO:1901700 | response to oxygen-containing compound | IEP | HCCA |
| BP | GO:1902025 | nitrate import | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 486 | 531 |
| No external refs found! |
