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  5. Gb_37254

Gb_37254 (OTP84)


Aliases : OTP84

Description : Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana (sp|q9m1v3|pp296_arath : 563.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_37254
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Gb_00194 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_00195 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_00201 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_02373 CRR22 Pentatricopeptide repeat-containing protein At3g09040,... 0.04 OrthoFinder output from all 47 species
Gb_03571 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Gb_03572 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_03959 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_03997 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_04420 OTP86 Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
Gb_04430 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Gb_04446 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Gb_04449 No alias RNA editing factor (MEF19) 0.04 OrthoFinder output from all 47 species
Gb_04533 CRR22 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_05649 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_07043 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_08128 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_09407 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Gb_09704 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Gb_10152 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Gb_10157 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_10713 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Gb_11219 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_11220 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_11926 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_12585 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Gb_13222 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_14133 OTP84 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_14956 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_14966 No alias Pentatricopeptide repeat-containing protein At4g20770... 0.03 OrthoFinder output from all 47 species
Gb_16032 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.05 OrthoFinder output from all 47 species
Gb_16327 CRR22 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_16546 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Gb_16664 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.06 OrthoFinder output from all 47 species
Gb_16986 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
Gb_17076 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_17077 CRR22 Pentatricopeptide repeat-containing protein At3g03580... 0.06 OrthoFinder output from all 47 species
Gb_17094 CRR22 RNA editing factor (MEF19) 0.03 OrthoFinder output from all 47 species
Gb_18745 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.04 OrthoFinder output from all 47 species
Gb_20187 DOT4 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
Gb_20749 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_21435 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Gb_22805 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_23798 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.06 OrthoFinder output from all 47 species
Gb_24692 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_24928 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Gb_25271 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_26571 OTP84 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
Gb_26696 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_27057 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_27322 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Gb_27437 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Gb_28393 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_29873 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_30661 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_31374 EMB2261 Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
Gb_32457 EMB2261 Pentatricopeptide repeat-containing protein DOT4,... 0.06 OrthoFinder output from all 47 species
Gb_33051 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Gb_33062 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_34248 CRR2 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_34816 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Gb_35190 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Gb_35645 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Gb_36081 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
Gb_36260 OTP84 Pentatricopeptide repeat-containing protein At1g09410,... 0.04 OrthoFinder output from all 47 species
Gb_36538 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
Gb_36676 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_37178 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
Gb_37509 CRR22 Pentatricopeptide repeat-containing protein At3g03580... 0.05 OrthoFinder output from all 47 species
Gb_37572 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Gb_38679 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Gb_40436 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Gb_41015 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
Gb_41234 OTP86 Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_41317 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 545 593
IPR002885 Pentatricopeptide_repeat 122 170
IPR002885 Pentatricopeptide_repeat 281 329
IPR002885 Pentatricopeptide_repeat 444 491
IPR032867 DYW_dom 718 832
IPR002885 Pentatricopeptide_repeat 415 442
IPR002885 Pentatricopeptide_repeat 356 382
IPR002885 Pentatricopeptide_repeat 619 643
IPR002885 Pentatricopeptide_repeat 384 412
No external refs found!