1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_38174

Gb_38174 (ABF2, ATAREB1, AREB1)


Aliases : ABF2, ATAREB1, AREB1

Description : transcription factor (bZIP)


Gene families : OG0000314 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38174
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00057740 DPBF3, AREB3,... RNA biosynthesis.transcriptional activation.bZIP... 0.06 OrthoFinder output from all 47 species
AT1G45249 ABF2, ATAREB1, AREB1 abscisic acid responsive elements-binding factor 2 0.03 OrthoFinder output from all 47 species
AT2G17770 ATBZIP27, BZIP27, FDP basic region/leucine zipper motif 27 0.03 OrthoFinder output from all 47 species
AT3G19290 AREB2, ABF4 ABRE binding factor 4 0.03 OrthoFinder output from all 47 species
Aev_g10271 AREB2, ABF4 bZIP class-A transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14563 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12573.t1 ABF2, ATAREB1,... bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22019 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g32144 ABF1 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g64730.1 GBF4, LOC_Os01g64730 transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
LOC_Os07g48660.1 DPBF4, ATBZIP12,... transcription factor (bZIP) 0.04 OrthoFinder output from all 47 species
LOC_Os09g36910.1 ATBZIP27,... transcription factor (bZIP) 0.02 OrthoFinder output from all 47 species
MA_18107g0010 ABF2, ATAREB1, AREB1 transcription factor (bZIP) 0.04 OrthoFinder output from all 47 species
Ore_g44055 DPBF3, AREB3 bZIP class-A transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02561 DPBF5, ABF3 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55556 ABF2, ATAREB1, AREB1 bZIP class-A transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g061990.3.1 ATBZIP27,... transcription factor (bZIP) 0.04 OrthoFinder output from all 47 species
Solyc02g083520.2.1 ATBZIP27,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e003794_P001 ABF2, ATAREB1,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e015956_P002 ABF2, ATAREB1,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e022136_P001 ABF2, ATAREB1,... transcription factor (bZIP) 0.03 OrthoFinder output from all 47 species
Zm00001e028884_P001 DPBF3, AREB3,... ABSCISIC ACID-INSENSITIVE 5-like protein 2... 0.03 OrthoFinder output from all 47 species
Zm00001e035915_P001 DPBF4, ATBZIP12,... transcription factor (bZIP) 0.04 OrthoFinder output from all 47 species
Zm00001e035978_P001 ATBZIP27,... transcription factor (bZIP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004827 bZIP 357 412
No external refs found!