1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_38455

Gb_38455


Description : Protein HOTHEAD OS=Arabidopsis thaliana (sp|q9s746|hth_arath : 293.0)


Gene families : OG0000755 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000755_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38455
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00028p00206910 evm_27.TU.AmTr_v1... (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G72970 EDA17, HTH Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 OrthoFinder output from all 47 species
AT5G51950 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 OrthoFinder output from all 47 species
Adi_g055034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G018600.1 Ceric.10G018600 not classified & original description: pacid=50613331... 0.03 OrthoFinder output from all 47 species
Dde_g28809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016856001 EDA17, HTH Cell wall.cutin and suberin.cuticular lipid... 0.06 OrthoFinder output from all 47 species
GSVIVT01019871001 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_16610 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_29960 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_31766 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_32365 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Gb_33524 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_37786 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_38452 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_39926 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_41784 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_101600g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10433135g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10434331g0010 EDA17, HTH Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10434495g0020 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_11792g0020 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_7181516g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g43877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo108291 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo112603 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo153538 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Smo235799 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo405960 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo407760 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo427468 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo429523 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc06g035580.3.1 Solyc06g035580 Protein HOTHEAD OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc06g062600.3.1 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.05 OrthoFinder output from all 47 species
Solyc08g080190.4.1 Solyc08g080190 Protein HOTHEAD OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g05899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002156_P001 Zm00001e002156 Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e007199_P001 Zm00001e007199 Protein HOTHEAD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e033949_P001 EDA17, HTH,... omega-hydroxy fatty acyl dehydrogenase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000172 GMC_OxRdtase_N 218 266
IPR000172 GMC_OxRdtase_N 65 156
IPR000172 GMC_OxRdtase_N 391 464
No external refs found!