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  5. Gb_38468

Gb_38468


Description : Monofunctional pimaradiene synthase OS=Pinus banksiana (sp|m4hy08|mpim1_pinbn : 99.4)


Gene families : OG0000661 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000661_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38468
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00046860 CPS, ATCPS1,... Phytohormones.gibberellin.synthesis.ent-copalyl... 0.03 OrthoFinder output from all 47 species
Ceric.1Z168500.1 CPS, ATCPS1,... EC_4.2 carbon-oxygen lyase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g44056 KS, KS1, ATKS1, ATKS, GA2 EC_5.5 intramolecular lyase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_10531 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.06 OrthoFinder output from all 47 species
Gb_25663 TPS03, ATTPS03 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
Gb_35203 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase. ent-copalyl... 0.04 OrthoFinder output from all 47 species
Gb_39619 TPS02 mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
LOC_Os02g36140.2 KS, KS1, ATKS1,... ent-kaurene synthase 0.05 OrthoFinder output from all 47 species
LOC_Os02g36210.1 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.02 OrthoFinder output from all 47 species
LOC_Os04g09900.1 CPS, ATCPS1,... ent-copalyl diphosphate synthase 0.02 OrthoFinder output from all 47 species
LOC_Os11g28490.1 LOC_Os11g28490 Stemod-13(17)-ene synthase OS=Oryza sativa subsp. indica... 0.02 OrthoFinder output from all 47 species
LOC_Os12g30824.1 KS, KS1, ATKS1,... ent-kaurene synthase 0.02 OrthoFinder output from all 47 species
MA_10433916g0010 CPS, ATCPS1,... mono-/sesquiterpene-/diterpene synthase 0.03 OrthoFinder output from all 47 species
MA_7940170g0010 CPS, ATCPS1,... Alpha-bisabolene synthase OS=Abies grandis... 0.04 OrthoFinder output from all 47 species
Mp6g05430.1 TPS04, TPS4, GES Bifunctional levopimaradiene synthase, chloroplastic... 0.02 OrthoFinder output from all 47 species
Ore_g14979 No alias EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Smo112927 CPS, ATCPS1,... Phytohormones.gibberellin.synthesis.ent-copalyl... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 8 53
No external refs found!