1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_38709

Gb_38709


Description : Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1 OS=Arabidopsis thaliana (sp|q94k49|alp1_arath : 151.0)


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_38709
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Ala_g21380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_03722 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_05153 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_05676 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.01 OrthoFinder output from all 47 species
Gb_10033 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_10530 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_13002 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.05 OrthoFinder output from all 47 species
Gb_15856 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_19878 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_23339 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_24969 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_26925 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_27420 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_27975 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_28057 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.05 OrthoFinder output from all 47 species
Gb_28925 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Gb_31798 No alias Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.06 OrthoFinder output from all 47 species
Gb_32519 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_41474 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Ore_g43390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 88 214
No external refs found!