Description : Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana (sp|q9smz2|pp347_arath : 566.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_39560 | |
| Cluster | HCCA: Cluster_157 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Len_g19027 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g53944 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_104937g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.05 | OrthoFinder output from all 47 species | |
| MA_137736g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| MA_38266g0010 | CRR22 | RNA editing factor (MEF19). RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
| MA_615077g0010 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
| MA_65500g0010 | No alias | Pentatricopeptide repeat-containing protein At1g08070,... | 0.05 | OrthoFinder output from all 47 species | |
| MA_71104g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
| MA_921g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032867 | DYW_dom | 643 | 767 |
| IPR002885 | Pentatricopeptide_repeat | 166 | 213 |
| IPR002885 | Pentatricopeptide_repeat | 470 | 517 |
| IPR002885 | Pentatricopeptide_repeat | 268 | 315 |
| IPR002885 | Pentatricopeptide_repeat | 369 | 416 |
| IPR002885 | Pentatricopeptide_repeat | 444 | 468 |
| IPR002885 | Pentatricopeptide_repeat | 610 | 639 |
| No external refs found! |
