Aliases : CRR22
Description : Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana (sp|q9sn39|pp320_arath : 526.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00014p00090010 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00155620 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00031p00067070 | emb1899, EMB175, EMB166 | Pentatricopeptide repeat-containing protein At5g03800... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00032p00177680 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00032p00190360 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00049p00223290 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00065p00033910 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g49740... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00081p00019740 | CRR22,... | Pentatricopeptide repeat-containing protein At5g27110... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00088p00045930 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g13880... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00170p00032020 | OTP86,... | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g005586 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g005800 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g009533 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g011562 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g014779 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g020508 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g079527 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g085223 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g089164 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07162 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g19060 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g24083 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28207 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0503.g073904 | No alias | not classified & original description: CDS=1-2580 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G053600.1 | Ceric.01G053600 | not classified & original description: pacid=50592089... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.11G086200.1 | OTP84, Ceric.11G086200 | not classified & original description: pacid=50595902... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.21G051400.1 | VAC1, ECB2,... | not classified & original description: pacid=50603510... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.28G059600.1 | OTP84, Ceric.28G059600 | not classified & original description: pacid=50569965... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G001600.1 | Ceric.30G001600 | not classified & original description: pacid=50608965... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G037100.1 | Ceric.30G037100 | not classified & original description: pacid=50608918... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G058400.1 | Ceric.36G058400 | not classified & original description: pacid=50568396... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g19046 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g25031 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g25271 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30287 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35959 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g43240 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g43253 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g35769 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g47810 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g50137 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03951 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g04371 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g04892 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g17670 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g22366 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g28696 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g51270 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g51445 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011887001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01024061001 | No alias | Pentatricopeptide repeat-containing protein At2g21090... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025639001 | No alias | Pentatricopeptide repeat-containing protein At3g53360,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01029382001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01030080001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033304001 | CRR28 | Pentatricopeptide repeat-containing protein At2g02980,... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01036511001 | No alias | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_02379 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_04381 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_04420 | OTP86 | Pentatricopeptide repeat-containing protein At3g03580... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_10713 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_10908 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_16898 | No alias | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_19828 | No alias | RNA editing factor (OTP82) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_21047 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_28780 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_32965 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_33411 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_37554 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38248 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38503 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_39725 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_41234 | OTP86 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g56850.1 | LOC_Os03g56850 | Pentatricopeptide repeat-containing protein At4g21300... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g06490.2 | SLO1, LOC_Os08g06490 | Pentatricopeptide repeat-containing protein At4g22760... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18578 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_100606g0010 | OTP84 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10214098g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10426261g0020 | CRR22 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10429371g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10429540g0020 | LOI1, MEF11 | Pentatricopeptide repeat-containing protein At4g14850... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10429837g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_108139g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| MA_112849g0010 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_114722g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_118886g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g20230... | 0.02 | OrthoFinder output from all 47 species | |
| MA_121102g0010 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| MA_124868g0020 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| MA_138190g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_14938g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_16226g0010 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_16823g0010 | CRR22 | RNA editing factor (MEF19) | 0.04 | OrthoFinder output from all 47 species | |
| MA_174226g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| MA_17949g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_18165g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
| MA_20585g0020 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| MA_20899g0020 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_30632g0020 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_30949g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_34492g0010 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_34492g0020 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_3449g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| MA_35442g0010 | No alias | RNA editing factor (SLO2) | 0.03 | OrthoFinder output from all 47 species | |
| MA_376862g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
| MA_385322g0010 | OTP82 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_412g0010 | REME1 | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
| MA_42343g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_4503g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| MA_483636g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| MA_50789g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| MA_55967g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| MA_64083g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_65500g0010 | No alias | Pentatricopeptide repeat-containing protein At1g08070,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_656915g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_681272g0010 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.05 | OrthoFinder output from all 47 species | |
| MA_683665g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| MA_68718g0020 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_68933g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_7379g0020 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| MA_86628g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_8678g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| MA_8868720g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
| MA_905781g0010 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | OrthoFinder output from all 47 species | |
| MA_9415113g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| MA_9463538g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | OrthoFinder output from all 47 species | |
| MA_956160g0010 | No alias | Pentatricopeptide repeat-containing protein At3g02330,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_957690g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.06 | OrthoFinder output from all 47 species | |
| MA_96662g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_97789g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g26540... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34533 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05873 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g01804 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05344 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05632 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g07605 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g33169 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g49399 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g28859 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo105776 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
| Smo70138 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Smo76175 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Smo81196 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g081020.1.1 | Solyc01g081020 | RNA editing factor (OTP80) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g100340.4.1 | Solyc01g100340 | Pentatricopeptide repeat-containing protein At1g09190... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g007430.1.1 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g53542 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g16797 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g43830 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031660_P001 | Zm00001e031660 | Pentatricopeptide repeat-containing protein At4g14170... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035654_P001 | EMB2758, Zm00001e035654 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036301_P001 | Zm00001e036301 | Pentatricopeptide repeat-containing protein At4g30700... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 615 | 638 |
| IPR002885 | Pentatricopeptide_repeat | 219 | 246 |
| IPR002885 | Pentatricopeptide_repeat | 414 | 438 |
| IPR002885 | Pentatricopeptide_repeat | 144 | 192 |
| IPR002885 | Pentatricopeptide_repeat | 439 | 486 |
| IPR002885 | Pentatricopeptide_repeat | 337 | 385 |
| IPR002885 | Pentatricopeptide_repeat | 540 | 588 |
| IPR002885 | Pentatricopeptide_repeat | 306 | 335 |
| IPR002885 | Pentatricopeptide_repeat | 274 | 303 |
| No external refs found! |
