Aliases : PSBW
Description : component PsbW of PS-II complex
Gene families : OG0002050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002050_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_40726 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00266120 | PSBW,... | Photosynthesis.photophosphorylation.photosystem II.PS-II... | 0.06 | OrthoFinder output from all 47 species | |
| AT2G30570 | PSBW | photosystem II reaction center W | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g47226 | MAC3A | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g12837 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g56334 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g30138 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001234.7 | No alias | Photosynthesis.photophosphorylation.photosystem II.PS-II... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g08641 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g00627 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01000743001 | PSBW | Photosynthesis.photophosphorylation.photosystem II.PS-II... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g43310.1 | PSBW, LOC_Os05g43310 | component PsbW of PS-II complex | 0.04 | OrthoFinder output from all 47 species | |
| Len_g36588 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g17242 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g17355 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_10431532g0010 | PSBW | component PsbW of PS-II complex | 0.05 | OrthoFinder output from all 47 species | |
| Mp5g14190.1 | PSBW | component PsbW of PS-II complex | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g33298 | No alias | component *(PsbW) of PS-II complex & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g11136 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g25239 | No alias | component *(PsbW) of PS-II complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g084050.4.1 | PSBW, Solyc06g084050 | component PsbW of PS-II complex | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g01488 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g23538 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g48859 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g52574 | PSBW | component *(PsbW) of PS-II complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e027386_P002 | PSBW, Zm00001e027386 | component PsbW of PS-II complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0009507 | chloroplast | IEA | Interproscan |
| CC | GO:0009523 | photosystem II | IEA | Interproscan |
| BP | GO:0015979 | photosynthesis | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
| MF | GO:0016829 | lyase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0071586 | CAAX-box protein processing | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009806 | PSII_PsbW_class2 | 1 | 134 |
| No external refs found! |
