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  5. Zm00001e001054_P002

Zm00001e001054_P002 (HAP5A, NF-YC1,...)


Aliases : HAP5A, NF-YC1, ATHAP5A, Zm00001e001054

Description : component NF-YC of NF-Y transcription factor complex


Gene families : OG0001038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001038_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001054_P002
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00054980 HAP5A, NF-YC1,... RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species
Aev_g07094 HAP5A, NF-YC1, ATHAP5A component *(NF-YC) of NF-Y transcription factor complex... 0.04 OrthoFinder output from all 47 species
Dac_g05040 HAP5A, NF-YC1, ATHAP5A component *(NF-YC) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
LOC_Os03g14669.2 HAP5A, NF-YC1,... component NF-YC of NF-Y transcription factor complex 0.04 OrthoFinder output from all 47 species
Lfl_g02803 NF-YC2, ATHAP5B, HAP5B component *(NF-YC) of NF-Y transcription factor complex... 0.03 OrthoFinder output from all 47 species
Smo58662 NF-YC2, ATHAP5B, HAP5B RNA biosynthesis.transcriptional activation.NF-Y... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 69 132
No external refs found!