1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e001885_P003

Zm00001e001885_P003 (Zm00001e001885)


Aliases : Zm00001e001885

Description : histone (H3)


Gene families : OG0000128 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001885_P003

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00168040 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from all 47 species
AT4G40040 No alias Histone superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g014653 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g014654 No alias histone *(H3) & original description: none 0.01 OrthoFinder output from all 47 species
Cre16.g661450 No alias Cell cycle.mitosis and meiosis.chromosome... 0.05 OrthoFinder output from all 47 species
Dac_g02480 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12416 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026582001 No alias Histone H3.2 OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
GSVIVT01027073001 HTR12, CENH3 Cell cycle.mitosis and meiosis.chromosome... 0.05 OrthoFinder output from all 47 species
GSVIVT01034510001 No alias Histone H3.2 OS=Pisum sativum 0.04 OrthoFinder output from all 47 species
Gb_27618 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
Gb_29027 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os01g64640.1 LOC_Os01g64640 histone (H3) 0.04 OrthoFinder output from all 47 species
LOC_Os05g36280.1 LOC_Os05g36280 histone (H3) 0.11 OrthoFinder output from all 47 species
LOC_Os05g41080.1 LOC_Os05g41080 histone H3 variant (CENH3) 0.06 OrthoFinder output from all 47 species
LOC_Os06g04030.1 LOC_Os06g04030 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os06g06510.1 LOC_Os06g06510 histone (H3) 0.02 OrthoFinder output from all 47 species
LOC_Os11g05730.1 LOC_Os11g05730 histone (H3) 0.03 OrthoFinder output from all 47 species
MA_350032g0010 No alias histone (H3) 0.03 OrthoFinder output from all 47 species
MA_56411g0010 No alias histone (H3) 0.02 OrthoFinder output from all 47 species
Nbi_g17122 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06112 No alias histone *(H3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06113 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g20165 No alias histone H3 variant *(CENH3) & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g074000.3.1 Solyc01g074000 histone (H3) 0.04 OrthoFinder output from all 47 species
Solyc01g080600.4.1 Solyc01g080600 histone (H3) 0.03 OrthoFinder output from all 47 species
Solyc02g077480.1.1 Solyc02g077480 histone (H3) 0.03 OrthoFinder output from all 47 species
Solyc05g051500.4.1 Solyc05g051500 histone (H3) 0.03 OrthoFinder output from all 47 species
Spa_g52113 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56118 No alias histone *(H3) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 30 161
No external refs found!