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  5. Zm00001e003418_P002

Zm00001e003418_P002 (Zm00001e003418)


Aliases : Zm00001e003418

Description : component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex


Gene families : OG0002089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002089_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003418_P002

Target Alias Description ECC score Gene Family Method Actions
Adi_g081353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14331 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.05 OrthoFinder output from all 47 species
Aob_g17567 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene16717.t1 Aspi01Gene16717 component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene64535.t1 Aspi01Gene64535 component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.04 OrthoFinder output from all 47 species
Azfi_s0378.g067319 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.02 OrthoFinder output from all 47 species
Ceric.10G054500.1 Ceric.10G054500 component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Ceric.18G063400.1 Ceric.18G063400 component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.07 OrthoFinder output from all 47 species
Cre08.g384950 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g05780 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.02 OrthoFinder output from all 47 species
Dcu_g09495 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.02 OrthoFinder output from all 47 species
GSVIVT01000588001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.02 OrthoFinder output from all 47 species
Gb_03117 No alias component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.02 OrthoFinder output from all 47 species
Gb_11742 No alias component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.04 OrthoFinder output from all 47 species
LOC_Os08g38240.1 LOC_Os08g38240 component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.04 OrthoFinder output from all 47 species
Lfl_g03230 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.02 OrthoFinder output from all 47 species
MA_202067g0010 No alias component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.03 OrthoFinder output from all 47 species
Ore_g09611 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Pir_g24887 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species
Pnu_g18790 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.04 OrthoFinder output from all 47 species
Sam_g16242 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.02 OrthoFinder output from all 47 species
Solyc07g065510.4.1 Solyc07g065510 component CPFS6/CFIm68 of Cleavage Factor I (CF-Im) complex 0.05 OrthoFinder output from all 47 species
Spa_g48266 No alias component *(CPFS6/CFIm68) of Cleavage Factor I (CF-Im)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 178 247
No external refs found!