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  5. Zm00001e003716_P001

Zm00001e003716_P001 (RBR, ATRBR1, RBR1,...)


Aliases : RBR, ATRBR1, RBR1, RB1, RB, Zm00001e003716

Description : cell cycle interphase key regulator


Gene families : OG0002400 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002400_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003716_P001

Target Alias Description ECC score Gene Family Method Actions
Als_g01960 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene66417.t1 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.05 OrthoFinder output from all 47 species
Cba_g14459 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.03 OrthoFinder output from all 47 species
Cba_g25385 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.02 OrthoFinder output from all 47 species
Ceric.12G003800.1 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.14 OrthoFinder output from all 47 species
Ceric.28G046300.1 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.02 OrthoFinder output from all 47 species
Dcu_g42453 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.04 OrthoFinder output from all 47 species
GSVIVT01035560001 RBR, ATRBR1,... Cell cycle.interphase.G1 phase.RB key regulator 0.09 OrthoFinder output from all 47 species
MA_10435560g0010 RBR, ATRBR1,... cell cycle interphase key regulator 0.04 OrthoFinder output from all 47 species
Msp_g14075 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.04 OrthoFinder output from all 47 species
Nbi_g06316 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.03 OrthoFinder output from all 47 species
Nbi_g42458 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.1 OrthoFinder output from all 47 species
Ppi_g05934 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.06 OrthoFinder output from all 47 species
Solyc09g091280.4.1 RBR, ATRBR1,... cell cycle interphase key regulator 0.07 OrthoFinder output from all 47 species
Tin_g13680 RBR, ATRBR1,... regulatory protein (RBR) of cell cycle interphase &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0051726 regulation of cell cycle IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042555 MCM complex IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051095 regulation of helicase activity IEP HCCA
BP GO:0051097 negative regulation of helicase activity IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1905462 regulation of DNA duplex unwinding IEP HCCA
BP GO:1905463 negative regulation of DNA duplex unwinding IEP HCCA
BP GO:1905774 regulation of DNA helicase activity IEP HCCA
BP GO:1905775 negative regulation of DNA helicase activity IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR015030 RB_C 890 961
IPR024599 RB_N 96 232
IPR002719 RB_B 730 857
IPR002720 RB_A 416 616
No external refs found!